1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os06g12610.1

LOC_Os06g12610.1


Description : auxin transporter (PIN). auxin efflux transporter (PIN)


Gene families : OG0000353 (Archaeplastida) Phylogenetic Tree(s): OG0000353_tree ,
OG_05_0000237 (LandPlants) Phylogenetic Tree(s): OG_05_0000237_tree ,
OG_06_0000465 (SeedPlants) Phylogenetic Tree(s): OG_06_0000465_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os06g12610.1
Cluster HCCA: Cluster_195

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00013p00241000 evm_27.TU.AmTr_v1... Solute transport.carrier-mediated transport.BART... 0.03 Archaeplastida
AMTR_s00019p00250330 evm_27.TU.AmTr_v1... Solute transport.carrier-mediated transport.BART... 0.04 Archaeplastida
AMTR_s00101p00149240 evm_27.TU.AmTr_v1... Solute transport.carrier-mediated transport.BART... 0.04 Archaeplastida
AT1G23080 PIN7, ATPIN7 Auxin efflux carrier family protein 0.04 Archaeplastida
AT1G77110 PIN6 Auxin efflux carrier family protein 0.04 Archaeplastida
AT2G01420 ATPIN4, PIN4 Auxin efflux carrier family protein 0.02 Archaeplastida
AT5G57090 EIR1, WAV6,... Auxin efflux carrier family protein 0.06 Archaeplastida
GSVIVT01008430001 No alias Solute transport.carrier-mediated transport.BART... 0.04 Archaeplastida
GSVIVT01011755001 No alias Solute transport.carrier-mediated transport.BART... 0.03 Archaeplastida
GSVIVT01011756001 No alias Solute transport.carrier-mediated transport.BART... 0.04 Archaeplastida
GSVIVT01019110001 No alias Solute transport.carrier-mediated transport.BART... 0.03 Archaeplastida
GSVIVT01025749001 No alias Solute transport.carrier-mediated transport.BART... 0.04 Archaeplastida
GSVIVT01031663001 No alias Solute transport.carrier-mediated transport.BART... 0.04 Archaeplastida
Gb_02144 No alias auxin transporter (PIN). auxin efflux transporter (PIN) 0.03 Archaeplastida
Gb_03018 No alias no hits & (original description: none) 0.03 Archaeplastida
Gb_06199 No alias auxin transporter (PIN). auxin efflux transporter (PIN) 0.03 Archaeplastida
Gb_23207 No alias auxin transporter (PIN). auxin efflux transporter (PIN) 0.05 Archaeplastida
Gb_37787 No alias auxin transporter (PIN). auxin efflux transporter (PIN) 0.03 Archaeplastida
LOC_Os01g45550.1 No alias auxin transporter (PIN). auxin efflux transporter (PIN) 0.03 Archaeplastida
MA_61553g0010 No alias auxin transporter (PIN). auxin efflux transporter (PIN) 0.02 Archaeplastida
MA_61553g0020 No alias auxin transporter (PIN). auxin efflux transporter (PIN) 0.02 Archaeplastida
MA_69724g0010 No alias auxin transporter (PIN). auxin efflux transporter (PIN) 0.03 Archaeplastida
Mp5g05150.1 No alias auxin transporter (PIN). auxin efflux transporter (PIN) 0.03 Archaeplastida
Pp3c10_24880V3.1 No alias Auxin efflux carrier family protein 0.03 Archaeplastida
Pp3c23_10200V3.1 No alias Auxin efflux carrier family protein 0.02 Archaeplastida
Smo234325 No alias Solute transport.carrier-mediated transport.BART... 0.02 Archaeplastida
Smo99301 No alias Solute transport.carrier-mediated transport.BART... 0.03 Archaeplastida
Solyc01g068410.4.1 No alias auxin transporter (PIN). auxin efflux transporter (PIN) 0.03 Archaeplastida
Solyc06g059730.3.1 No alias auxin transporter (PIN). auxin efflux transporter (PIN) 0.03 Archaeplastida
Solyc07g006900.2.1 No alias auxin transporter (PIN). auxin efflux transporter (PIN) 0.07 Archaeplastida
Solyc10g078370.2.1 No alias auxin transporter (PIN). auxin efflux transporter (PIN) 0.04 Archaeplastida
Zm00001e010118_P004 No alias auxin transporter (PIN). auxin efflux transporter (PIN) 0.04 Archaeplastida
Zm00001e015800_P001 No alias auxin transporter (PIN). auxin efflux transporter (PIN) 0.05 Archaeplastida
Zm00001e024071_P002 No alias auxin transporter (PIN). auxin efflux transporter (PIN) 0.03 Archaeplastida
Zm00001e036089_P001 No alias auxin transporter (PIN). auxin efflux transporter (PIN) 0.02 Archaeplastida
Zm00001e037682_P001 No alias auxin transporter (PIN). auxin efflux transporter (PIN) 0.12 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0016021 integral component of membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP Neighborhood
BP GO:0000160 phosphorelay signal transduction system IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004601 peroxidase activity IEP Neighborhood
MF GO:0004672 protein kinase activity IEP Neighborhood
MF GO:0004673 protein histidine kinase activity IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006793 phosphorus metabolic process IEP Neighborhood
BP GO:0006796 phosphate-containing compound metabolic process IEP Neighborhood
BP GO:0006979 response to oxidative stress IEP Neighborhood
MF GO:0016209 antioxidant activity IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
InterPro domains Description Start Stop
IPR004776 Mem_trans 9 587
No external refs found!