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  5. LOC_Os06g12820.1

LOC_Os06g12820.1


Description : Protein ALTERED XYLOGLUCAN 4-like OS=Arabidopsis thaliana (sp|q9lrs2|tbl22_arath : 293.0)


Gene families : OG0000288 (Archaeplastida) Phylogenetic Tree(s): OG0000288_tree ,
OG_05_0010558 (LandPlants) Phylogenetic Tree(s): OG_05_0010558_tree ,
OG_06_0010215 (SeedPlants) Phylogenetic Tree(s): OG_06_0010215_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os06g12820.1
Cluster HCCA: Cluster_210

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00006p00266030 evm_27.TU.AmTr_v1... Protein trichome birefringence-like 19 OS=Arabidopsis thaliana 0.05 Archaeplastida
AMTR_s00006p00266110 evm_27.TU.AmTr_v1... Protein trichome birefringence-like 19 OS=Arabidopsis thaliana 0.05 Archaeplastida
AMTR_s00006p00266250 evm_27.TU.AmTr_v1... Protein trichome birefringence-like 20 OS=Arabidopsis thaliana 0.03 Archaeplastida
AT1G01430 TBL25 TRICHOME BIREFRINGENCE-LIKE 25 0.03 Archaeplastida
AT1G70230 TBL27 TRICHOME BIREFRINGENCE-LIKE 27 0.03 Archaeplastida
AT4G01080 TBL26 TRICHOME BIREFRINGENCE-LIKE 26 0.03 Archaeplastida
AT4G23790 TBL24 TRICHOME BIREFRINGENCE-LIKE 24 0.04 Archaeplastida
AT5G15900 TBL19 TRICHOME BIREFRINGENCE-LIKE 19 0.06 Archaeplastida
GSVIVT01036469001 No alias Protein trichome birefringence-like 19 OS=Arabidopsis thaliana 0.12 Archaeplastida
Gb_25866 No alias mannan O-acetyltransferase (MOAT) 0.1 Archaeplastida
Gb_40364 No alias xyloglucan O-acetyltransferase (AXY4). mannan... 0.06 Archaeplastida
LOC_Os01g46400.1 No alias Protein trichome birefringence-like 19 OS=Arabidopsis... 0.05 Archaeplastida
LOC_Os06g16170.1 No alias Protein trichome birefringence-like 20 OS=Arabidopsis... 0.04 Archaeplastida
MA_10427759g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_245850g0010 No alias mannan O-acetyltransferase (MOAT) 0.09 Archaeplastida
Pp3c16_10090V3.1 No alias TRICHOME BIREFRINGENCE-LIKE 25 0.04 Archaeplastida
Smo418889 No alias Protein trichome birefringence-like 19 OS=Arabidopsis thaliana 0.03 Archaeplastida
Solyc02g065600.3.1 No alias Protein trichome birefringence-like 19 OS=Arabidopsis... 0.07 Archaeplastida
Solyc02g065610.3.1 No alias Protein trichome birefringence-like 19 OS=Arabidopsis... 0.04 Archaeplastida
Solyc02g087120.4.1 No alias Protein ALTERED XYLOGLUCAN 4-like OS=Arabidopsis... 0.04 Archaeplastida
Solyc02g089700.4.1 No alias Protein trichome birefringence-like 19 OS=Arabidopsis... 0.14 Archaeplastida
Solyc02g089710.3.1 No alias Protein trichome birefringence-like 19 OS=Arabidopsis... 0.07 Archaeplastida
Solyc03g046270.4.1 No alias Protein trichome birefringence-like 19 OS=Arabidopsis... 0.03 Archaeplastida
Zm00001e004741_P002 No alias Protein trichome birefringence-like 19 OS=Arabidopsis... 0.04 Archaeplastida
Zm00001e015715_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e015716_P001 No alias Protein trichome birefringence-like 20 OS=Arabidopsis... 0.02 Archaeplastida
Zm00001e020298_P002 No alias Protein trichome birefringence-like 19 OS=Arabidopsis... 0.03 Archaeplastida
Zm00001e020949_P001 No alias Protein ALTERED XYLOGLUCAN 4 OS=Arabidopsis thaliana... 0.12 Archaeplastida
Zm00001e030880_P002 No alias Protein ALTERED XYLOGLUCAN 4-like OS=Arabidopsis... 0.06 Archaeplastida
Zm00001e030881_P001 No alias Protein ALTERED XYLOGLUCAN 4 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Zm00001e030883_P001 No alias Protein ALTERED XYLOGLUCAN 4 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Zm00001e036072_P001 No alias Protein ALTERED XYLOGLUCAN 4 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Zm00001e036803_P001 No alias Protein trichome birefringence-like 19 OS=Arabidopsis... 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP Neighborhood
MF GO:0004601 peroxidase activity IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
CC GO:0005856 cytoskeleton IEP Neighborhood
CC GO:0005885 Arp2/3 protein complex IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
BP GO:0005976 polysaccharide metabolic process IEP Neighborhood
BP GO:0006073 cellular glucan metabolic process IEP Neighborhood
BP GO:0006950 response to stress IEP Neighborhood
BP GO:0006979 response to oxidative stress IEP Neighborhood
BP GO:0007015 actin filament organization IEP Neighborhood
BP GO:0008064 regulation of actin polymerization or depolymerization IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
MF GO:0008194 UDP-glycosyltransferase activity IEP Neighborhood
BP GO:0009059 macromolecule biosynthetic process IEP Neighborhood
BP GO:0009250 glucan biosynthetic process IEP Neighborhood
BP GO:0010215 cellulose microfibril organization IEP Neighborhood
BP GO:0010638 positive regulation of organelle organization IEP Neighborhood
CC GO:0015629 actin cytoskeleton IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
BP GO:0016043 cellular component organization IEP Neighborhood
BP GO:0016051 carbohydrate biosynthetic process IEP Neighborhood
MF GO:0016209 antioxidant activity IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Neighborhood
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Neighborhood
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Neighborhood
MF GO:0016759 cellulose synthase activity IEP Neighborhood
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
BP GO:0030198 extracellular matrix organization IEP Neighborhood
BP GO:0030243 cellulose metabolic process IEP Neighborhood
BP GO:0030244 cellulose biosynthetic process IEP Neighborhood
BP GO:0030832 regulation of actin filament length IEP Neighborhood
BP GO:0030833 regulation of actin filament polymerization IEP Neighborhood
BP GO:0030838 positive regulation of actin filament polymerization IEP Neighborhood
CC GO:0031225 anchored component of membrane IEP Neighborhood
BP GO:0031334 positive regulation of protein complex assembly IEP Neighborhood
BP GO:0032271 regulation of protein polymerization IEP Neighborhood
BP GO:0032273 positive regulation of protein polymerization IEP Neighborhood
BP GO:0032535 regulation of cellular component size IEP Neighborhood
BP GO:0032956 regulation of actin cytoskeleton organization IEP Neighborhood
BP GO:0032970 regulation of actin filament-based process IEP Neighborhood
BP GO:0033043 regulation of organelle organization IEP Neighborhood
BP GO:0033692 cellular polysaccharide biosynthetic process IEP Neighborhood
BP GO:0034314 Arp2/3 complex-mediated actin nucleation IEP Neighborhood
BP GO:0034637 cellular carbohydrate biosynthetic process IEP Neighborhood
BP GO:0034645 cellular macromolecule biosynthetic process IEP Neighborhood
MF GO:0035251 UDP-glucosyltransferase activity IEP Neighborhood
MF GO:0042910 xenobiotic transmembrane transporter activity IEP Neighborhood
BP GO:0043062 extracellular structure organization IEP Neighborhood
CC GO:0043226 organelle IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043229 intracellular organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
BP GO:0043254 regulation of protein complex assembly IEP Neighborhood
BP GO:0044042 glucan metabolic process IEP Neighborhood
BP GO:0044087 regulation of cellular component biogenesis IEP Neighborhood
BP GO:0044089 positive regulation of cellular component biogenesis IEP Neighborhood
BP GO:0044249 cellular biosynthetic process IEP Neighborhood
BP GO:0044262 cellular carbohydrate metabolic process IEP Neighborhood
BP GO:0044264 cellular polysaccharide metabolic process IEP Neighborhood
CC GO:0044430 cytoskeletal part IEP Neighborhood
BP GO:0045010 actin nucleation IEP Neighborhood
MF GO:0046527 glucosyltransferase activity IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
BP GO:0048518 positive regulation of biological process IEP Neighborhood
BP GO:0048522 positive regulation of cellular process IEP Neighborhood
BP GO:0050896 response to stimulus IEP Neighborhood
BP GO:0051128 regulation of cellular component organization IEP Neighborhood
BP GO:0051130 positive regulation of cellular component organization IEP Neighborhood
BP GO:0051273 beta-glucan metabolic process IEP Neighborhood
BP GO:0051274 beta-glucan biosynthetic process IEP Neighborhood
BP GO:0051493 regulation of cytoskeleton organization IEP Neighborhood
BP GO:0051495 positive regulation of cytoskeleton organization IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
BP GO:0071840 cellular component organization or biogenesis IEP Neighborhood
BP GO:0090066 regulation of anatomical structure size IEP Neighborhood
BP GO:0097435 supramolecular fiber organization IEP Neighborhood
BP GO:0110053 regulation of actin filament organization IEP Neighborhood
BP GO:1901576 organic substance biosynthetic process IEP Neighborhood
BP GO:1902903 regulation of supramolecular fiber organization IEP Neighborhood
BP GO:1902905 positive regulation of supramolecular fiber organization IEP Neighborhood
InterPro domains Description Start Stop
IPR025846 PMR5_N_dom 158 210
IPR026057 PC-Esterase 211 506
No external refs found!