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  5. LOC_Os06g12860.1

LOC_Os06g12860.1


Description : Protein ALTERED XYLOGLUCAN 4 OS=Arabidopsis thaliana (sp|o04523|tbl27_arath : 308.0)


Gene families : OG0000288 (Archaeplastida) Phylogenetic Tree(s): OG0000288_tree ,
OG_05_0018830 (LandPlants) Phylogenetic Tree(s): OG_05_0018830_tree ,
OG_06_0018376 (SeedPlants) Phylogenetic Tree(s): OG_06_0018376_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os06g12860.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00006p00266250 evm_27.TU.AmTr_v1... Protein trichome birefringence-like 20 OS=Arabidopsis thaliana 0.01 Archaeplastida
AT3G02440 TBL20 TRICHOME BIREFRINGENCE-LIKE 20 0.01 Archaeplastida
AT3G28150 TBL22 TRICHOME BIREFRINGENCE-LIKE 22 0.25 Archaeplastida
AT4G25360 TBL18 TRICHOME BIREFRINGENCE-LIKE 18 0.02 Archaeplastida
LOC_Os02g49650.1 No alias Protein trichome birefringence-like 19 OS=Arabidopsis... 0.02 Archaeplastida
LOC_Os06g12850.1 No alias Protein ALTERED XYLOGLUCAN 4 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os06g16200.1 No alias Protein trichome birefringence-like 20 OS=Arabidopsis... 0.03 Archaeplastida
MA_10432038g0010 No alias mannan O-acetyltransferase (MOAT) 0.03 Archaeplastida
MA_245850g0010 No alias mannan O-acetyltransferase (MOAT) 0.04 Archaeplastida
Pp3c16_10090V3.1 No alias TRICHOME BIREFRINGENCE-LIKE 25 0.01 Archaeplastida
Solyc02g089700.4.1 No alias Protein trichome birefringence-like 19 OS=Arabidopsis... 0.02 Archaeplastida
Zm00001e020298_P002 No alias Protein trichome birefringence-like 19 OS=Arabidopsis... 0.02 Archaeplastida
Zm00001e020949_P001 No alias Protein ALTERED XYLOGLUCAN 4 OS=Arabidopsis thaliana... 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR025846 PMR5_N_dom 90 142
IPR026057 PC-Esterase 143 445
No external refs found!