LOC_Os06g12930.1


Description : Pentatricopeptide repeat-containing protein At2g41720 OS=Arabidopsis thaliana (sp|q8rws8|pp199_arath : 84.3)


Gene families : OG0007624 (Archaeplastida) Phylogenetic Tree(s): OG0007624_tree ,
OG_05_0006946 (LandPlants) Phylogenetic Tree(s): OG_05_0006946_tree ,
OG_06_0006926 (SeedPlants) Phylogenetic Tree(s): OG_06_0006926_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os06g12930.1
Cluster HCCA: Cluster_92


Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
CC GO:0005667 transcription factor complex IEP Neighborhood
CC GO:0005669 transcription factor TFIID complex IEP Neighborhood
BP GO:0006352 DNA-templated transcription, initiation IEP Neighborhood
BP GO:0006367 transcription initiation from RNA polymerase II promoter IEP Neighborhood
MF GO:0008107 galactoside 2-alpha-L-fucosyltransferase activity IEP Neighborhood
MF GO:0008417 fucosyltransferase activity IEP Neighborhood
MF GO:0031127 alpha-(1,2)-fucosyltransferase activity IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
CC GO:0032993 protein-DNA complex IEP Neighborhood
BP GO:0042546 cell wall biogenesis IEP Neighborhood
CC GO:0044422 organelle part IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044427 chromosomal part IEP Neighborhood
CC GO:0044446 intracellular organelle part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
CC GO:0044798 nuclear transcription factor complex IEP Neighborhood
CC GO:0044815 DNA packaging complex IEP Neighborhood
CC GO:0090575 RNA polymerase II transcription factor complex IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!