LOC_Os06g13030.1


Description : transcription factor (LIM)


Gene families : OG0000926 (Archaeplastida) Phylogenetic Tree(s): OG0000926_tree ,
OG_05_0082144 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0071048 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os06g13030.1
Cluster HCCA: Cluster_105

Target Alias Description ECC score Gene Family Method Actions
AT2G45800 No alias GATA type zinc finger transcription factor family protein 0.03 Archaeplastida
GSVIVT01037819001 No alias RNA biosynthesis.transcriptional activation.LIM... 0.07 Archaeplastida
LOC_Os10g35930.1 No alias transcription factor (LIM) 0.04 Archaeplastida
MA_20195g0010 No alias transcription factor (LIM) 0.03 Archaeplastida
Zm00001e015234_P001 No alias transcription factor (LIM) 0.04 Archaeplastida
Zm00001e023098_P001 No alias transcription factor (LIM) 0.03 Archaeplastida
Zm00001e030885_P002 No alias transcription factor (LIM) 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEP Neighborhood
MF GO:0005543 phospholipid binding IEP Neighborhood
MF GO:0008092 cytoskeletal protein binding IEP Neighborhood
MF GO:0008194 UDP-glycosyltransferase activity IEP Neighborhood
MF GO:0008289 lipid binding IEP Neighborhood
MF GO:0015018 galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity IEP Neighborhood
MF GO:0015020 glucuronosyltransferase activity IEP Neighborhood
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Neighborhood
InterPro domains Description Start Stop
IPR001781 Znf_LIM 13 65
IPR001781 Znf_LIM 112 167
No external refs found!