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  5. LOC_Os06g16390.1

LOC_Os06g16390.1


Description : catalytic component CLF|SWN|MEA of VRN/FIS/EMF core complexes. class I/Ez histone methyltransferase component of histone lysine methylation/demethylation


Gene families : OG0002279 (Archaeplastida) Phylogenetic Tree(s): OG0002279_tree ,
OG_05_0001849 (LandPlants) Phylogenetic Tree(s): OG_05_0001849_tree ,
OG_06_0001954 (SeedPlants) Phylogenetic Tree(s): OG_06_0001954_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os06g16390.1
Cluster HCCA: Cluster_338

Target Alias Description ECC score Gene Family Method Actions
AT2G23380 CLF, SET1, ICU1, SDG1 SET domain-containing protein 0.03 Archaeplastida
Pp3c22_22940V3.1 No alias SET domain-containing protein 0.01 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEP Neighborhood
BP GO:0006351 transcription, DNA-templated IEP Neighborhood
BP GO:0006486 protein glycosylation IEP Neighborhood
MF GO:0008135 translation factor activity, RNA binding IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
CC GO:0019867 outer membrane IEP Neighborhood
MF GO:0030246 carbohydrate binding IEP Neighborhood
BP GO:0032774 RNA biosynthetic process IEP Neighborhood
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Neighborhood
BP GO:0043413 macromolecule glycosylation IEP Neighborhood
BP GO:0070085 glycosylation IEP Neighborhood
BP GO:0097659 nucleic acid-templated transcription IEP Neighborhood
InterPro domains Description Start Stop
IPR001214 SET_dom 758 861
No external refs found!