1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os06g16540.1

LOC_Os06g16540.1


Description : no hits & (original description: none)


Gene families : OG0000018 (Archaeplastida) Phylogenetic Tree(s): OG0000018_tree ,
OG_05_0000007 (LandPlants) Phylogenetic Tree(s): OG_05_0000007_tree ,
OG_06_0000001 (SeedPlants) Phylogenetic Tree(s): OG_06_0000001_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os06g16540.1
Cluster HCCA: Cluster_129

Target Alias Description ECC score Gene Family Method Actions
ChrUn.fgenesh.mRNA.55 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os01g03590.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os01g07820.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os01g19960.1 No alias no hits & (original description: none) 0.06 Archaeplastida
LOC_Os01g20190.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os01g21490.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os01g33630.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os01g38810.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os01g46330.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os01g71910.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os01g74210.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os02g16590.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os02g24310.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os02g25370.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os02g25520.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os02g25560.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os02g51230.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os03g27860.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os03g43280.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os03g54020.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os04g19000.1 No alias no hits & (original description: none) 0.06 Archaeplastida
LOC_Os04g20450.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os04g25590.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os04g29900.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os05g03950.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os05g14000.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os05g16350.1 No alias no hits & (original description: none) 0.06 Archaeplastida
LOC_Os05g16580.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os05g18570.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os05g18990.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os05g19700.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os05g26100.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os05g27860.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os05g29820.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os05g50880.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os06g10380.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os06g15050.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os06g15340.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os06g15850.1 No alias Ethylene receptor 4 OS=Oryza sativa subsp. japonica... 0.06 Archaeplastida
LOC_Os06g16900.1 No alias no hits & (original description: none) 0.07 Archaeplastida
LOC_Os06g21150.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os06g33030.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os06g35350.1 No alias no hits & (original description: none) 0.07 Archaeplastida
LOC_Os06g42580.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os07g03350.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os07g15800.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os07g17510.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os07g31900.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os07g32750.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os07g46120.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os08g03730.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os08g08950.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os08g12280.1 No alias no hits & (original description: none) 0.06 Archaeplastida
LOC_Os08g17120.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os08g26280.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os09g11060.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os09g14260.1 No alias Glutathione S-transferase T3 OS=Arabidopsis thaliana... 0.06 Archaeplastida
LOC_Os09g16890.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os09g17290.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os09g20130.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os09g25240.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os10g07554.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os10g07562.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os10g08650.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os10g29010.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os11g14350.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os11g24870.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os11g35762.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os11g40960.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os11g44100.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os12g11600.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os12g13080.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os12g14200.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os12g14820.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os12g16400.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os12g22910.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os12g23240.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os12g25300.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os12g26070.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os12g36480.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os12g37240.1 No alias no hits & (original description: none) 0.07 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0006508 proteolysis IEA Interproscan
MF GO:0008234 cysteine-type peptidase activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR003653 Peptidase_C48_C 889 1002
No external refs found!