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  5. LOC_Os06g18930.1

LOC_Os06g18930.1


Description : no hits & (original description: none)


Gene families : OG0001747 (Archaeplastida) Phylogenetic Tree(s): OG0001747_tree ,
OG_05_0001180 (LandPlants) Phylogenetic Tree(s): OG_05_0001180_tree ,
OG_06_0000663 (SeedPlants) Phylogenetic Tree(s): OG_06_0000663_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os06g18930.1
Cluster HCCA: Cluster_65

Target Alias Description ECC score Gene Family Method Actions
LOC_Os04g08640.2 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os06g17570.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os06g18960.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os06g19210.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os06g19300.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os06g19360.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e024100_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e028749_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e036861_P002 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e036905_P001 No alias no hits & (original description: none) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0003333 amino acid transmembrane transport IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004222 metalloendopeptidase activity IEP Neighborhood
MF GO:0004674 protein serine/threonine kinase activity IEP Neighborhood
MF GO:0005506 iron ion binding IEP Neighborhood
BP GO:0006810 transport IEP Neighborhood
BP GO:0006811 ion transport IEP Neighborhood
BP GO:0006820 anion transport IEP Neighborhood
BP GO:0006865 amino acid transport IEP Neighborhood
BP GO:0008037 cell recognition IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
MF GO:0008237 metallopeptidase activity IEP Neighborhood
MF GO:0010333 terpene synthase activity IEP Neighborhood
BP GO:0015711 organic anion transport IEP Neighborhood
BP GO:0015849 organic acid transport IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP Neighborhood
BP GO:0022414 reproductive process IEP Neighborhood
CC GO:0031012 extracellular matrix IEP Neighborhood
BP GO:0034220 ion transmembrane transport IEP Neighborhood
MF GO:0042910 xenobiotic transmembrane transporter activity IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
CC GO:0044421 extracellular region part IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
BP GO:0046942 carboxylic acid transport IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
BP GO:0048544 recognition of pollen IEP Neighborhood
BP GO:0051179 localization IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood
BP GO:0055085 transmembrane transport IEP Neighborhood
BP GO:0071702 organic substance transport IEP Neighborhood
BP GO:0071705 nitrogen compound transport IEP Neighborhood
BP GO:0098656 anion transmembrane transport IEP Neighborhood
BP GO:1903825 organic acid transmembrane transport IEP Neighborhood
BP GO:1905039 carboxylic acid transmembrane transport IEP Neighborhood
InterPro domains Description Start Stop
IPR026961 PGG_dom 776 894
IPR026961 PGG_dom 411 519
IPR026961 PGG_dom 9 118
IPR026961 PGG_dom 191 302
IPR026961 PGG_dom 584 693
No external refs found!