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  5. AMTR_s00007p00186150

AMTR_s00007p00186150 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00007.151

Description : Chromatin organisation.histones.H4-type histone


Gene families : OG0000170 (Archaeplastida) Phylogenetic Tree(s): OG0000170_tree ,
OG_05_0000135 (LandPlants) Phylogenetic Tree(s): OG_05_0000135_tree ,
OG_06_0000106 (SeedPlants) Phylogenetic Tree(s): OG_06_0000106_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00007p00186150
Cluster HCCA: Cluster_114

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00256370 evm_27.TU.AmTr_v1... Chromatin organisation.histones.H4-type histone 0.04 Archaeplastida
AT3G46320 No alias Histone superfamily protein 0.04 Archaeplastida
AT5G59690 No alias Histone superfamily protein 0.03 Archaeplastida
GSVIVT01025005001 No alias Chromatin organisation.histones.H4-type histone 0.03 Archaeplastida
GSVIVT01032631001 No alias Chromatin organisation.histones.H4-type histone 0.05 Archaeplastida
GSVIVT01034208001 No alias Chromatin organisation.histones.H4-type histone 0.04 Archaeplastida
MA_7644388g0010 No alias histone (H4) 0.03 Archaeplastida
MA_89764g0010 No alias histone (H4) 0.03 Archaeplastida
Solyc06g005420.1.1 No alias histone (H4) 0.03 Archaeplastida
Solyc06g075930.1.1 No alias histone (H4) 0.03 Archaeplastida
Solyc11g066160.1.1 No alias histone (H4) 0.04 Archaeplastida
Zm00001e027269_P001 No alias histone (H4) 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR007125 Histone_H2A/H2B/H3 28 94
No external refs found!