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  5. LOC_Os06g22540.1

LOC_Os06g22540.1


Description : no hits & (original description: none)


Gene families : OG0000011 (Archaeplastida) Phylogenetic Tree(s): OG0000011_tree ,
OG_05_0000008 (LandPlants) Phylogenetic Tree(s): OG_05_0000008_tree ,
OG_06_0000013 (SeedPlants) Phylogenetic Tree(s): OG_06_0000013_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os06g22540.1
Cluster HCCA: Cluster_64

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00013p00114420 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MADS box... 0.02 Archaeplastida
AT4G09960 STK, AGL11 K-box region and MADS-box transcription factor family protein 0.02 Archaeplastida
GSVIVT01009171001 No alias RNA biosynthesis.transcriptional activation.MADS box... 0.05 Archaeplastida
GSVIVT01027579001 No alias RNA biosynthesis.transcriptional activation.MADS box... 0.04 Archaeplastida
Gb_03807 No alias transcription factor (MADS/AGL) 0.03 Archaeplastida
Gb_05128 No alias transcription factor (MADS/AGL) 0.03 Archaeplastida
Gb_15398 No alias transcription factor (MADS/AGL) 0.03 Archaeplastida
LOC_Os02g36924.1 No alias transcription factor (MADS/AGL) 0.05 Archaeplastida
MA_6544g0010 No alias Floral homeotic protein AGAMOUS OS=Panax ginseng... 0.02 Archaeplastida
Solyc03g114830.3.1 No alias transcription factor (MADS/AGL) 0.03 Archaeplastida
Solyc04g081000.3.1 No alias transcription factor (MADS/AGL) 0.02 Archaeplastida
Solyc08g080100.4.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Solyc11g032100.2.1 No alias transcription factor (MADS/AGL) 0.02 Archaeplastida
Solyc12g038510.2.1 No alias transcription factor (MADS/AGL) 0.04 Archaeplastida
Zm00001e038096_P002 No alias transcription factor (MADS/AGL) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0015291 secondary active transmembrane transporter activity IEP Neighborhood
MF GO:0015297 antiporter activity IEP Neighborhood
MF GO:0022804 active transmembrane transporter activity IEP Neighborhood
MF GO:0042910 xenobiotic transmembrane transporter activity IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!