LOC_Os06g27990.1


Description : no hits & (original description: none)


Gene families : OG0001754 (Archaeplastida) Phylogenetic Tree(s): OG0001754_tree ,
OG_05_0001129 (LandPlants) Phylogenetic Tree(s): OG_05_0001129_tree ,
OG_06_0000591 (SeedPlants) Phylogenetic Tree(s): OG_06_0000591_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os06g27990.1
Cluster HCCA: Cluster_208

Target Alias Description ECC score Gene Family Method Actions
LOC_Os01g31040.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os02g21980.1 No alias no hits & (original description: none) 0.06 Archaeplastida
LOC_Os03g30030.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os03g45734.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os03g56040.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os05g36040.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os07g20940.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os08g16960.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os08g21410.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os11g31860.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os12g21980.1 No alias no hits & (original description: none) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0000062 fatty-acyl-CoA binding IEP Neighborhood
MF GO:0000166 nucleotide binding IEP Neighborhood
MF GO:0003747 translation release factor activity IEP Neighborhood
MF GO:0004061 arylformamidase activity IEP Neighborhood
BP GO:0006415 translational termination IEP Neighborhood
BP GO:0006568 tryptophan metabolic process IEP Neighborhood
BP GO:0006569 tryptophan catabolic process IEP Neighborhood
BP GO:0006576 cellular biogenic amine metabolic process IEP Neighborhood
BP GO:0006586 indolalkylamine metabolic process IEP Neighborhood
MF GO:0008079 translation termination factor activity IEP Neighborhood
BP GO:0009063 cellular amino acid catabolic process IEP Neighborhood
BP GO:0009074 aromatic amino acid family catabolic process IEP Neighborhood
BP GO:0009310 amine catabolic process IEP Neighborhood
BP GO:0016054 organic acid catabolic process IEP Neighborhood
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP Neighborhood
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
BP GO:0019441 tryptophan catabolic process to kynurenine IEP Neighborhood
BP GO:0022411 cellular component disassembly IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
BP GO:0032984 protein-containing complex disassembly IEP Neighborhood
MF GO:0033218 amide binding IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
BP GO:0042180 cellular ketone metabolic process IEP Neighborhood
BP GO:0042402 cellular biogenic amine catabolic process IEP Neighborhood
BP GO:0042430 indole-containing compound metabolic process IEP Neighborhood
BP GO:0042436 indole-containing compound catabolic process IEP Neighborhood
BP GO:0042537 benzene-containing compound metabolic process IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
MF GO:0043531 ADP binding IEP Neighborhood
BP GO:0043624 cellular protein complex disassembly IEP Neighborhood
BP GO:0044106 cellular amine metabolic process IEP Neighborhood
BP GO:0044282 small molecule catabolic process IEP Neighborhood
BP GO:0046218 indolalkylamine catabolic process IEP Neighborhood
BP GO:0046395 carboxylic acid catabolic process IEP Neighborhood
BP GO:0070189 kynurenine metabolic process IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
MF GO:1901567 fatty acid derivative binding IEP Neighborhood
BP GO:1901606 alpha-amino acid catabolic process IEP Neighborhood
MF GO:1901681 sulfur compound binding IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!