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  5. LOC_Os06g28250.1

LOC_Os06g28250.1


Description : transcription factor (FAR1)


Gene families : OG0008738 (Archaeplastida) Phylogenetic Tree(s): OG0008738_tree ,
OG_05_0008123 (LandPlants) Phylogenetic Tree(s): OG_05_0008123_tree ,
OG_06_0005130 (SeedPlants) Phylogenetic Tree(s): OG_06_0005130_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os06g28250.1
Cluster HCCA: Cluster_4

Target Alias Description ECC score Gene Family Method Actions
LOC_Os06g32530.1 No alias transcription factor (FAR1) 0.07 Archaeplastida
LOC_Os10g06860.1 No alias transcription factor (FAR1) 0.04 Archaeplastida
LOC_Os10g06890.1 No alias transcription factor (FAR1) 0.02 Archaeplastida
LOC_Os11g02980.1 No alias transcription factor (FAR1) 0.05 Archaeplastida
LOC_Os12g18910.1 No alias transcription factor (FAR1) 0.05 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP Neighborhood
MF GO:0003954 NADH dehydrogenase activity IEP Neighborhood
MF GO:0004129 cytochrome-c oxidase activity IEP Neighborhood
MF GO:0004518 nuclease activity IEP Neighborhood
MF GO:0004519 endonuclease activity IEP Neighborhood
MF GO:0004521 endoribonuclease activity IEP Neighborhood
MF GO:0004523 RNA-DNA hybrid ribonuclease activity IEP Neighborhood
MF GO:0004540 ribonuclease activity IEP Neighborhood
MF GO:0005198 structural molecule activity IEP Neighborhood
CC GO:0005739 mitochondrion IEP Neighborhood
BP GO:0006412 translation IEP Neighborhood
BP GO:0006518 peptide metabolic process IEP Neighborhood
MF GO:0008137 NADH dehydrogenase (ubiquinone) activity IEP Neighborhood
BP GO:0009059 macromolecule biosynthetic process IEP Neighborhood
BP GO:0009060 aerobic respiration IEP Neighborhood
MF GO:0015002 heme-copper terminal oxidase activity IEP Neighborhood
BP GO:0015074 DNA integration IEP Neighborhood
BP GO:0015980 energy derivation by oxidation of organic compounds IEP Neighborhood
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP Neighborhood
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP Neighborhood
MF GO:0016675 oxidoreductase activity, acting on a heme group of donors IEP Neighborhood
MF GO:0016676 oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor IEP Neighborhood
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP Neighborhood
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Neighborhood
BP GO:0034641 cellular nitrogen compound metabolic process IEP Neighborhood
BP GO:0034645 cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:0043043 peptide biosynthetic process IEP Neighborhood
BP GO:0043603 cellular amide metabolic process IEP Neighborhood
BP GO:0043604 amide biosynthetic process IEP Neighborhood
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Neighborhood
BP GO:0045333 cellular respiration IEP Neighborhood
MF GO:0048038 quinone binding IEP Neighborhood
MF GO:0050136 NADH dehydrogenase (quinone) activity IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
BP GO:1901566 organonitrogen compound biosynthetic process IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!