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  5. LOC_Os06g29310.1

LOC_Os06g29310.1


Description : protease (OTS)


Gene families : OG0001011 (Archaeplastida) Phylogenetic Tree(s): OG0001011_tree ,
OG_05_0000935 (LandPlants) Phylogenetic Tree(s): OG_05_0000935_tree ,
OG_06_0002742 (SeedPlants) Phylogenetic Tree(s): OG_06_0002742_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os06g29310.1
Cluster HCCA: Cluster_141

Target Alias Description ECC score Gene Family Method Actions
AT1G10570 OTS2, ULP1C Cysteine proteinases superfamily protein 0.03 Archaeplastida
AT1G60220 OTS1, ULP1D UB-like protease 1D 0.04 Archaeplastida
Cpa|evm.model.tig00001234.8 No alias Probable ubiquitin-like-specific protease 2A... 0.02 Archaeplastida
Cre06.g278197 No alias Probable ubiquitin-like-specific protease 2B... 0.01 Archaeplastida
Gb_21582 No alias no hits & (original description: none) 0.02 Archaeplastida
Mp2g26300.1 No alias protease (SPF). protease (OTS) 0.04 Archaeplastida
Pp3c25_7310V3.1 No alias UB-like protease 1D 0.03 Archaeplastida
Pp3c9_9860V3.1 No alias Cysteine proteinases superfamily protein 0.03 Archaeplastida
Solyc11g017040.2.1 No alias protease (SPF) 0.03 Archaeplastida
Zm00001e028717_P001 No alias protease (SPF) 0.04 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0006508 proteolysis IEA Interproscan
MF GO:0008234 cysteine-type peptidase activity IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000439 transcription factor TFIIH core complex IEP Neighborhood
MF GO:0001671 ATPase activator activity IEP Neighborhood
MF GO:0003909 DNA ligase activity IEP Neighborhood
MF GO:0003910 DNA ligase (ATP) activity IEP Neighborhood
MF GO:0004386 helicase activity IEP Neighborhood
MF GO:0004518 nuclease activity IEP Neighborhood
MF GO:0004519 endonuclease activity IEP Neighborhood
MF GO:0004521 endoribonuclease activity IEP Neighborhood
MF GO:0004525 ribonuclease III activity IEP Neighborhood
MF GO:0004540 ribonuclease activity IEP Neighborhood
MF GO:0004609 phosphatidylserine decarboxylase activity IEP Neighborhood
MF GO:0004721 phosphoprotein phosphatase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
CC GO:0005643 nuclear pore IEP Neighborhood
CC GO:0005667 transcription factor complex IEP Neighborhood
BP GO:0006139 nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0006289 nucleotide-excision repair IEP Neighborhood
BP GO:0006352 DNA-templated transcription, initiation IEP Neighborhood
BP GO:0006396 RNA processing IEP Neighborhood
BP GO:0006397 mRNA processing IEP Neighborhood
BP GO:0006725 cellular aromatic compound metabolic process IEP Neighborhood
BP GO:0006904 vesicle docking involved in exocytosis IEP Neighborhood
MF GO:0008047 enzyme activator activity IEP Neighborhood
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
BP GO:0008654 phospholipid biosynthetic process IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
BP GO:0016070 RNA metabolic process IEP Neighborhood
BP GO:0016311 dephosphorylation IEP Neighborhood
MF GO:0016462 pyrophosphatase activity IEP Neighborhood
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Neighborhood
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Neighborhood
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Neighborhood
MF GO:0016886 ligase activity, forming phosphoric ester bonds IEP Neighborhood
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP Neighborhood
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Neighborhood
MF GO:0017056 structural constituent of nuclear pore IEP Neighborhood
MF GO:0017111 nucleoside-triphosphatase activity IEP Neighborhood
BP GO:0022406 membrane docking IEP Neighborhood
CC GO:0030880 RNA polymerase complex IEP Neighborhood
BP GO:0031123 RNA 3'-end processing IEP Neighborhood
BP GO:0031124 mRNA 3'-end processing IEP Neighborhood
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP Neighborhood
BP GO:0034641 cellular nitrogen compound metabolic process IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
CC GO:0044428 nuclear part IEP Neighborhood
CC GO:0044798 nuclear transcription factor complex IEP Neighborhood
BP GO:0046483 heterocycle metabolic process IEP Neighborhood
BP GO:0048278 vesicle docking IEP Neighborhood
BP GO:0051640 organelle localization IEP Neighborhood
BP GO:0051641 cellular localization IEP Neighborhood
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Neighborhood
MF GO:0060590 ATPase regulator activity IEP Neighborhood
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
CC GO:0090575 RNA polymerase II transcription factor complex IEP Neighborhood
BP GO:0140029 exocytic process IEP Neighborhood
BP GO:0140056 organelle localization by membrane tethering IEP Neighborhood
MF GO:0140097 catalytic activity, acting on DNA IEP Neighborhood
BP GO:1901360 organic cyclic compound metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR003653 Peptidase_C48_C 259 453
No external refs found!