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  5. LOC_Os06g29400.1

LOC_Os06g29400.1


Description : component TOUGH of DCL1-HYL1 miRNA biogenesis complex


Gene families : OG0006076 (Archaeplastida) Phylogenetic Tree(s): OG0006076_tree ,
OG_05_0006644 (LandPlants) Phylogenetic Tree(s): OG_05_0006644_tree ,
OG_06_0007400 (SeedPlants) Phylogenetic Tree(s): OG_06_0007400_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os06g29400.1
Cluster HCCA: Cluster_141

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00050p00190920 evm_27.TU.AmTr_v1... RNA biosynthesis.RNA polymerase II-dependent... 0.04 Archaeplastida
Cre13.g568700 No alias RNA biosynthesis.RNA polymerase II-dependent... 0.01 Archaeplastida
GSVIVT01008206001 No alias RNA biosynthesis.RNA polymerase II-dependent... 0.03 Archaeplastida
MA_10431106g0020 No alias component TOUGH of DCL1-HYL1 miRNA biogenesis complex 0.05 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
BP GO:0006396 RNA processing IEA Interproscan
BP GO:0006397 mRNA processing IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005543 phospholipid binding IEP Neighborhood
MF GO:0008289 lipid binding IEP Neighborhood
BP GO:0022607 cellular component assembly IEP Neighborhood
BP GO:0034622 cellular protein-containing complex assembly IEP Neighborhood
MF GO:0035091 phosphatidylinositol binding IEP Neighborhood
BP GO:0043248 proteasome assembly IEP Neighborhood
BP GO:0043933 protein-containing complex subunit organization IEP Neighborhood
MF GO:0060090 molecular adaptor activity IEP Neighborhood
BP GO:0065003 protein-containing complex assembly IEP Neighborhood
InterPro domains Description Start Stop
IPR011666 DUF1604 40 121
IPR000061 Surp 408 456
No external refs found!