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  5. LOC_Os06g35300.1

LOC_Os06g35300.1


Description : Exopolygalacturonase OS=Zea mays (sp|p35338|pglr2_maize : 422.0) & Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase(50.3.2 : 234.8)


Gene families : OG0000535 (Archaeplastida) Phylogenetic Tree(s): OG0000535_tree ,
OG_05_0000281 (LandPlants) Phylogenetic Tree(s): OG_05_0000281_tree ,
OG_06_0000124 (SeedPlants) Phylogenetic Tree(s): OG_06_0000124_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os06g35300.1
Cluster HCCA: Cluster_60

Target Alias Description ECC score Gene Family Method Actions
LOC_Os06g40890.1 No alias Exopolygalacturonase OS=Zea mays (sp|p26216|pglr1_maize... 0.03 Archaeplastida
Zm00001e014066_P002 No alias Exopolygalacturonase OS=Zea mays (sp|p35339|pglr3_maize... 0.03 Archaeplastida
Zm00001e025021_P003 No alias Exopolygalacturonase OS=Zea mays (sp|p35339|pglr3_maize... 0.03 Archaeplastida
Zm00001e030536_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e042518_P001 No alias no hits & (original description: none) 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0004650 polygalacturonase activity IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005516 calmodulin binding IEP Neighborhood
InterPro domains Description Start Stop
IPR000743 Glyco_hydro_28 25 302
No external refs found!