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  5. LOC_Os06g35320.1

LOC_Os06g35320.1


Description : Exopolygalacturonase OS=Zea mays (sp|p35339|pglr3_maize : 549.0) & Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase(50.3.2 : 300.9)


Gene families : OG0000535 (Archaeplastida) Phylogenetic Tree(s): OG0000535_tree ,
OG_05_0000281 (LandPlants) Phylogenetic Tree(s): OG_05_0000281_tree ,
OG_06_0000124 (SeedPlants) Phylogenetic Tree(s): OG_06_0000124_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os06g35320.1
Cluster HCCA: Cluster_17

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00270640 evm_27.TU.AmTr_v1... Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase 0.09 Archaeplastida
AT1G02790 PGA4 polygalacturonase 4 0.05 Archaeplastida
AT3G07820 No alias Pectin lyase-like superfamily protein 0.08 Archaeplastida
AT3G07830 No alias Pectin lyase-like superfamily protein 0.06 Archaeplastida
AT3G07840 No alias Pectin lyase-like superfamily protein 0.04 Archaeplastida
AT3G07850 No alias Pectin lyase-like superfamily protein 0.03 Archaeplastida
AT3G14040 No alias Pectin lyase-like superfamily protein 0.04 Archaeplastida
AT5G48140 No alias Pectin lyase-like superfamily protein 0.04 Archaeplastida
GSVIVT01020794001 No alias Polygalacturonase OS=Nicotiana tabacum 0.02 Archaeplastida
GSVIVT01028044001 No alias Exopolygalacturonase clone GBGE184 OS=Arabidopsis thaliana 0.06 Archaeplastida
GSVIVT01030017001 No alias Polygalacturonase OS=Gossypium hirsutum 0.05 Archaeplastida
GSVIVT01030023001 No alias Polygalacturonase OS=Gossypium hirsutum 0.06 Archaeplastida
GSVIVT01030030001 No alias Polygalacturonase OS=Gossypium hirsutum 0.02 Archaeplastida
GSVIVT01035103001 No alias Exopolygalacturonase (Fragment) OS=Platanus acerifolia 0.07 Archaeplastida
LOC_Os01g33300.1 No alias Exopolygalacturonase OS=Zea mays (sp|p35339|pglr3_maize... 0.1 Archaeplastida
LOC_Os06g40890.1 No alias Exopolygalacturonase OS=Zea mays (sp|p26216|pglr1_maize... 0.06 Archaeplastida
Solyc01g066070.3.1 No alias Exopolygalacturonase (Fragment) OS=Platanus acerifolia... 0.07 Archaeplastida
Solyc06g009200.3.1 No alias Polygalacturonase OS=Nicotiana tabacum... 0.05 Archaeplastida
Solyc07g044870.4.1 No alias Polygalacturonase OS=Nicotiana tabacum... 0.08 Archaeplastida
Solyc10g047590.3.1 No alias Polygalacturonase OS=Gossypium hirsutum... 0.03 Archaeplastida
Zm00001e002846_P002 No alias Exopolygalacturonase (Fragment) OS=Platanus acerifolia... 0.08 Archaeplastida
Zm00001e014066_P002 No alias Exopolygalacturonase OS=Zea mays (sp|p35339|pglr3_maize... 0.05 Archaeplastida
Zm00001e014069_P001 No alias Exopolygalacturonase OS=Zea mays (sp|p35339|pglr3_maize... 0.08 Archaeplastida
Zm00001e014072_P001 No alias Exopolygalacturonase OS=Zea mays (sp|p35339|pglr3_maize... 0.08 Archaeplastida
Zm00001e017747_P001 No alias Exopolygalacturonase OS=Zea mays (sp|p35339|pglr3_maize... 0.11 Archaeplastida
Zm00001e022246_P002 No alias Exopolygalacturonase (Fragment) OS=Platanus acerifolia... 0.1 Archaeplastida
Zm00001e025021_P003 No alias Exopolygalacturonase OS=Zea mays (sp|p35339|pglr3_maize... 0.09 Archaeplastida
Zm00001e026354_P001 No alias Exopolygalacturonase OS=Zea mays (sp|p35339|pglr3_maize... 0.09 Archaeplastida
Zm00001e030524_P001 No alias Exopolygalacturonase OS=Zea mays (sp|p35339|pglr3_maize... 0.07 Archaeplastida
Zm00001e030525_P001 No alias Exopolygalacturonase OS=Zea mays (sp|p35339|pglr3_maize... 0.04 Archaeplastida
Zm00001e030528_P001 No alias Exopolygalacturonase OS=Zea mays (sp|p35338|pglr2_maize... 0.07 Archaeplastida
Zm00001e030529_P001 No alias Exopolygalacturonase OS=Zea mays (sp|p35338|pglr2_maize... 0.08 Archaeplastida
Zm00001e030530_P001 No alias Exopolygalacturonase OS=Zea mays (sp|p26216|pglr1_maize... 0.06 Archaeplastida
Zm00001e030532_P001 No alias Exopolygalacturonase OS=Zea mays (sp|p35338|pglr2_maize : 345.0) 0.11 Archaeplastida
Zm00001e030533_P001 No alias Exopolygalacturonase OS=Zea mays (sp|p26216|pglr1_maize... 0.06 Archaeplastida
Zm00001e030534_P001 No alias Exopolygalacturonase OS=Zea mays (sp|p26216|pglr1_maize... 0.05 Archaeplastida
Zm00001e030535_P001 No alias Exopolygalacturonase OS=Zea mays (sp|p26216|pglr1_maize... 0.05 Archaeplastida
Zm00001e030537_P001 No alias Exopolygalacturonase OS=Zea mays (sp|p26216|pglr1_maize... 0.05 Archaeplastida
Zm00001e030541_P001 No alias Exopolygalacturonase OS=Zea mays (sp|p26216|pglr1_maize... 0.02 Archaeplastida
Zm00001e030542_P001 No alias Exopolygalacturonase OS=Zea mays (sp|p35338|pglr2_maize... 0.11 Archaeplastida
Zm00001e042494_P001 No alias Exopolygalacturonase OS=Zea mays (sp|p26216|pglr1_maize... 0.06 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0004650 polygalacturonase activity IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004857 enzyme inhibitor activity IEP Neighborhood
MF GO:0005092 GDP-dissociation inhibitor activity IEP Neighborhood
MF GO:0005094 Rho GDP-dissociation inhibitor activity IEP Neighborhood
MF GO:0005215 transporter activity IEP Neighborhood
BP GO:0006810 transport IEP Neighborhood
BP GO:0006811 ion transport IEP Neighborhood
BP GO:0006812 cation transport IEP Neighborhood
MF GO:0008324 cation transmembrane transporter activity IEP Neighborhood
MF GO:0015075 ion transmembrane transporter activity IEP Neighborhood
MF GO:0015077 monovalent inorganic cation transmembrane transporter activity IEP Neighborhood
MF GO:0015078 proton transmembrane transporter activity IEP Neighborhood
MF GO:0015291 secondary active transmembrane transporter activity IEP Neighborhood
MF GO:0015297 antiporter activity IEP Neighborhood
MF GO:0015298 solute:cation antiporter activity IEP Neighborhood
MF GO:0015299 solute:proton antiporter activity IEP Neighborhood
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Neighborhood
CC GO:0016021 integral component of membrane IEP Neighborhood
MF GO:0016837 carbon-oxygen lyase activity, acting on polysaccharides IEP Neighborhood
MF GO:0019829 cation-transporting ATPase activity IEP Neighborhood
MF GO:0022804 active transmembrane transporter activity IEP Neighborhood
MF GO:0022853 active ion transmembrane transporter activity IEP Neighborhood
MF GO:0022857 transmembrane transporter activity IEP Neighborhood
MF GO:0022890 inorganic cation transmembrane transporter activity IEP Neighborhood
MF GO:0030234 enzyme regulator activity IEP Neighborhood
MF GO:0030570 pectate lyase activity IEP Neighborhood
MF GO:0030599 pectinesterase activity IEP Neighborhood
MF GO:0030976 thiamine pyrophosphate binding IEP Neighborhood
CC GO:0031224 intrinsic component of membrane IEP Neighborhood
CC GO:0033178 proton-transporting two-sector ATPase complex, catalytic domain IEP Neighborhood
MF GO:0036442 proton-exporting ATPase activity IEP Neighborhood
BP GO:0042545 cell wall modification IEP Neighborhood
MF GO:0042625 ATPase coupled ion transmembrane transporter activity IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
MF GO:0044769 ATPase activity, coupled to transmembrane movement of ions, rotational mechanism IEP Neighborhood
BP GO:0045229 external encapsulating structure organization IEP Neighborhood
MF GO:0046961 proton-transporting ATPase activity, rotational mechanism IEP Neighborhood
BP GO:0051179 localization IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood
MF GO:0052689 carboxylic ester hydrolase activity IEP Neighborhood
BP GO:0055085 transmembrane transport IEP Neighborhood
BP GO:0071554 cell wall organization or biogenesis IEP Neighborhood
BP GO:0071555 cell wall organization IEP Neighborhood
MF GO:0098772 molecular function regulator IEP Neighborhood
InterPro domains Description Start Stop
IPR000743 Glyco_hydro_28 72 401
No external refs found!