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Aliases : evm_27.TU.AmTr_v1.0_scaffold00007.227
Description : RNA biosynthesis.transcriptional activation.AS2/LOB transcription factor
Gene families : OG0000101 (Archaeplastida) Phylogenetic Tree(s): OG0000101_tree ,
OG_05_0000037 (LandPlants) Phylogenetic Tree(s): OG_05_0000037_tree ,
OG_06_0002612 (SeedPlants) Phylogenetic Tree(s): OG_06_0002612_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: AMTR_s00007p00227160 | |
| Cluster | HCCA: Cluster_98 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT3G27650 | LBD25 | LOB domain-containing protein 25 | 0.06 | Archaeplastida | |
| Gb_19384 | No alias | transcription factor (AS2/LOB) | 0.06 | Archaeplastida | |
| LOC_Os05g07270.1 | No alias | transcription factor (AS2/LOB) | 0.03 | Archaeplastida | |
| LOC_Os05g27980.1 | No alias | transcription factor (AS2/LOB) | 0.02 | Archaeplastida | |
| MA_88711g0010 | No alias | transcription factor (AS2/LOB) | 0.02 | Archaeplastida | |
| Mp7g17250.1 | No alias | transcription factor (AS2/LOB) | 0.01 | Archaeplastida | |
| Solyc02g086480.1.1 | No alias | transcription factor (AS2/LOB) | 0.03 | Archaeplastida | |
| Solyc05g048740.3.1 | No alias | transcription factor (AS2/LOB) | 0.1 | Archaeplastida | |
| Solyc06g050950.3.1 | No alias | transcription factor (AS2/LOB) | 0.02 | Archaeplastida | |
| Zm00001e019004_P002 | No alias | transcription factor (AS2/LOB) | 0.02 | Archaeplastida | |
| Zm00001e026736_P001 | No alias | transcription factor (AS2/LOB) | 0.03 | Archaeplastida | |
| Zm00001e030195_P001 | No alias | transcription factor (AS2/LOB) | 0.01 | Archaeplastida | |
| Zm00001e031510_P001 | No alias | transcription factor (AS2/LOB) | 0.02 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000156 | phosphorelay response regulator activity | IEP | Neighborhood |
| BP | GO:0000160 | phosphorelay signal transduction system | IEP | Neighborhood |
| MF | GO:0004180 | carboxypeptidase activity | IEP | Neighborhood |
| MF | GO:0004185 | serine-type carboxypeptidase activity | IEP | Neighborhood |
| MF | GO:0004601 | peroxidase activity | IEP | Neighborhood |
| MF | GO:0004888 | transmembrane signaling receptor activity | IEP | Neighborhood |
| MF | GO:0004970 | ionotropic glutamate receptor activity | IEP | Neighborhood |
| MF | GO:0005216 | ion channel activity | IEP | Neighborhood |
| MF | GO:0005230 | extracellular ligand-gated ion channel activity | IEP | Neighborhood |
| MF | GO:0005231 | excitatory extracellular ligand-gated ion channel activity | IEP | Neighborhood |
| MF | GO:0005234 | extracellularly glutamate-gated ion channel activity | IEP | Neighborhood |
| BP | GO:0006979 | response to oxidative stress | IEP | Neighborhood |
| MF | GO:0008066 | glutamate receptor activity | IEP | Neighborhood |
| BP | GO:0008150 | biological_process | IEP | Neighborhood |
| MF | GO:0008238 | exopeptidase activity | IEP | Neighborhood |
| MF | GO:0008762 | UDP-N-acetylmuramate dehydrogenase activity | IEP | Neighborhood |
| MF | GO:0015267 | channel activity | IEP | Neighborhood |
| MF | GO:0015276 | ligand-gated ion channel activity | IEP | Neighborhood |
| MF | GO:0016209 | antioxidant activity | IEP | Neighborhood |
| MF | GO:0016614 | oxidoreductase activity, acting on CH-OH group of donors | IEP | Neighborhood |
| MF | GO:0016616 | oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor | IEP | Neighborhood |
| MF | GO:0016684 | oxidoreductase activity, acting on peroxide as acceptor | IEP | Neighborhood |
| MF | GO:0022803 | passive transmembrane transporter activity | IEP | Neighborhood |
| MF | GO:0022824 | transmitter-gated ion channel activity | IEP | Neighborhood |
| MF | GO:0022834 | ligand-gated channel activity | IEP | Neighborhood |
| MF | GO:0022835 | transmitter-gated channel activity | IEP | Neighborhood |
| MF | GO:0022836 | gated channel activity | IEP | Neighborhood |
| MF | GO:0022838 | substrate-specific channel activity | IEP | Neighborhood |
| MF | GO:0022839 | ion gated channel activity | IEP | Neighborhood |
| CC | GO:0030288 | outer membrane-bounded periplasmic space | IEP | Neighborhood |
| MF | GO:0030594 | neurotransmitter receptor activity | IEP | Neighborhood |
| BP | GO:0035556 | intracellular signal transduction | IEP | Neighborhood |
| MF | GO:0038023 | signaling receptor activity | IEP | Neighborhood |
| CC | GO:0042597 | periplasmic space | IEP | Neighborhood |
| MF | GO:0048037 | cofactor binding | IEP | Neighborhood |
| MF | GO:0050660 | flavin adenine dinucleotide binding | IEP | Neighborhood |
| BP | GO:0055114 | oxidation-reduction process | IEP | Neighborhood |
| MF | GO:0060089 | molecular transducer activity | IEP | Neighborhood |
| MF | GO:0070008 | serine-type exopeptidase activity | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR004883 | LOB | 18 | 117 |
| No external refs found! |