LOC_Os06g39740.1


Description : subunit beta of peripheral CF1 subcomplex of ATP synthase complex


Gene families : OG0000722 (Archaeplastida) Phylogenetic Tree(s): OG0000722_tree ,
OG_05_0001384 (LandPlants) Phylogenetic Tree(s): OG_05_0001384_tree ,
OG_06_0000778 (SeedPlants) Phylogenetic Tree(s): OG_06_0000778_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os06g39740.1
Cluster HCCA: Cluster_233

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00606p00000120 evm_27.TU.AmTr_v1... ATP synthase subunit beta, chloroplastic OS=Amborella trichopoda 0.06 Archaeplastida
ATCG00480 ATPB, PB ATP synthase subunit beta 0.06 Archaeplastida
GSVIVT01006210001 No alias ATP synthase subunit beta, chloroplastic OS=Vitis vinifera 0.03 Archaeplastida
Gb_00175 No alias ATP synthase subunit beta, chloroplastic OS=Picea abies... 0.02 Archaeplastida
Gb_06833 No alias subunit epsilon of peripheral CF1 subcomplex of ATP... 0.02 Archaeplastida
Gb_22349 No alias subunit beta of peripheral CF1 subcomplex of ATP synthase complex 0.02 Archaeplastida
Gb_37463 No alias subunit epsilon of peripheral CF1 subcomplex of ATP... 0.03 Archaeplastida
LOC_Os01g25065.1 No alias ATP synthase subunit beta, chloroplastic OS=Oryza sativa... 0.14 Archaeplastida
LOC_Os03g55874.1 No alias subunit epsilon of peripheral CF1 subcomplex of ATP... 0.15 Archaeplastida
LOC_Os05g35320.1 No alias ATP synthase subunit beta, chloroplastic OS=Oryza sativa... 0.2 Archaeplastida
LOC_Os10g21266.1 No alias subunit beta of peripheral CF1 subcomplex of ATP synthase complex 0.16 Archaeplastida
LOC_Os12g10570.1 No alias ATP synthase subunit beta, chloroplastic OS=Oryza sativa... 0.13 Archaeplastida
Solyc00g500064.1.1 No alias subunit beta of peripheral CF1 subcomplex of ATP synthase complex 0.05 Archaeplastida
Solyc04g039850.1.1 No alias ATP synthase subunit beta, chloroplastic OS=Agapanthus... 0.04 Archaeplastida
Solyc07g021180.3.1 No alias ATP synthase subunit beta, chloroplastic OS=Nicotiana... 0.1 Archaeplastida
Zm00001e003901_P001 No alias no hits & (original description: none) 0.08 Archaeplastida
Zm00001e042030_P001 No alias no hits & (original description: none) 0.08 Archaeplastida
Zm00001e042068_P001 No alias no hits & (original description: none) 0.08 Archaeplastida
Zm00001e042081_P001 No alias no hits & (original description: none) 0.08 Archaeplastida
Zm00001e042082_P001 No alias ATP synthase subunit beta, chloroplastic OS=Zea mays... 0.09 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
BP GO:0046034 ATP metabolic process IEA Interproscan
BP GO:1902600 proton transmembrane transport IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP Neighborhood
MF GO:0005198 structural molecule activity IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
CC GO:0005840 ribosome IEP Neighborhood
BP GO:0006091 generation of precursor metabolites and energy IEP Neighborhood
BP GO:0006164 purine nucleotide biosynthetic process IEP Neighborhood
BP GO:0006412 translation IEP Neighborhood
BP GO:0006518 peptide metabolic process IEP Neighborhood
BP GO:0006754 ATP biosynthetic process IEP Neighborhood
BP GO:0009058 biosynthetic process IEP Neighborhood
BP GO:0009059 macromolecule biosynthetic process IEP Neighborhood
BP GO:0009124 nucleoside monophosphate biosynthetic process IEP Neighborhood
BP GO:0009127 purine nucleoside monophosphate biosynthetic process IEP Neighborhood
BP GO:0009142 nucleoside triphosphate biosynthetic process IEP Neighborhood
BP GO:0009145 purine nucleoside triphosphate biosynthetic process IEP Neighborhood
BP GO:0009152 purine ribonucleotide biosynthetic process IEP Neighborhood
BP GO:0009156 ribonucleoside monophosphate biosynthetic process IEP Neighborhood
BP GO:0009165 nucleotide biosynthetic process IEP Neighborhood
BP GO:0009168 purine ribonucleoside monophosphate biosynthetic process IEP Neighborhood
BP GO:0009201 ribonucleoside triphosphate biosynthetic process IEP Neighborhood
BP GO:0009206 purine ribonucleoside triphosphate biosynthetic process IEP Neighborhood
BP GO:0009260 ribonucleotide biosynthetic process IEP Neighborhood
CC GO:0009521 photosystem IEP Neighborhood
CC GO:0009522 photosystem I IEP Neighborhood
CC GO:0009523 photosystem II IEP Neighborhood
CC GO:0009539 photosystem II reaction center IEP Neighborhood
CC GO:0009579 thylakoid IEP Neighborhood
BP GO:0009767 photosynthetic electron transport chain IEP Neighborhood
BP GO:0009772 photosynthetic electron transport in photosystem II IEP Neighborhood
BP GO:0010109 regulation of photosynthesis IEP Neighborhood
MF GO:0015077 monovalent inorganic cation transmembrane transporter activity IEP Neighborhood
MF GO:0015078 proton transmembrane transporter activity IEP Neighborhood
BP GO:0015979 photosynthesis IEP Neighborhood
BP GO:0015985 energy coupled proton transport, down electrochemical gradient IEP Neighborhood
BP GO:0015986 ATP synthesis coupled proton transport IEP Neighborhood
MF GO:0016168 chlorophyll binding IEP Neighborhood
BP GO:0018130 heterocycle biosynthetic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
BP GO:0019438 aromatic compound biosynthetic process IEP Neighborhood
BP GO:0019684 photosynthesis, light reaction IEP Neighborhood
BP GO:0022900 electron transport chain IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP Neighborhood
BP GO:0034645 cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Neighborhood
BP GO:0042548 regulation of photosynthesis, light reaction IEP Neighborhood
BP GO:0042549 photosystem II stabilization IEP Neighborhood
BP GO:0043043 peptide biosynthetic process IEP Neighborhood
CC GO:0043226 organelle IEP Neighborhood
CC GO:0043228 non-membrane-bounded organelle IEP Neighborhood
CC GO:0043229 intracellular organelle IEP Neighborhood
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Neighborhood
BP GO:0043467 regulation of generation of precursor metabolites and energy IEP Neighborhood
BP GO:0043603 cellular amide metabolic process IEP Neighborhood
BP GO:0043604 amide biosynthetic process IEP Neighborhood
BP GO:0044249 cellular biosynthetic process IEP Neighborhood
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
CC GO:0044436 thylakoid part IEP Neighborhood
CC GO:0044444 cytoplasmic part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
MF GO:0045156 electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity IEP Neighborhood
CC GO:0045263 proton-transporting ATP synthase complex, coupling factor F(o) IEP Neighborhood
BP GO:0046390 ribose phosphate biosynthetic process IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0072522 purine-containing compound biosynthetic process IEP Neighborhood
BP GO:0090407 organophosphate biosynthetic process IEP Neighborhood
CC GO:0098796 membrane protein complex IEP Neighborhood
BP GO:1901137 carbohydrate derivative biosynthetic process IEP Neighborhood
BP GO:1901293 nucleoside phosphate biosynthetic process IEP Neighborhood
BP GO:1901362 organic cyclic compound biosynthetic process IEP Neighborhood
BP GO:1901566 organonitrogen compound biosynthetic process IEP Neighborhood
BP GO:1901576 organic substance biosynthetic process IEP Neighborhood
CC GO:1990904 ribonucleoprotein complex IEP Neighborhood
InterPro domains Description Start Stop
IPR000194 ATPase_F1/V1/A1_a/bsu_nucl-bd 152 372
IPR004100 ATPase_F1/V1/A1_a/bsu_N 25 95
No external refs found!