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  5. LOC_Os06g40720.1

LOC_Os06g40720.1


Description : Probable calcium-binding protein CML21 OS=Arabidopsis thaliana (sp|q52k82|cml21_arath : 275.0)


Gene families : OG0002583 (Archaeplastida) Phylogenetic Tree(s): OG0002583_tree ,
OG_05_0002620 (LandPlants) Phylogenetic Tree(s): OG_05_0002620_tree ,
OG_06_0002529 (SeedPlants) Phylogenetic Tree(s): OG_06_0002529_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os06g40720.1
Cluster HCCA: Cluster_327

Target Alias Description ECC score Gene Family Method Actions
AT3G24110 No alias Calcium-binding EF-hand family protein 0.07 Archaeplastida
LOC_Os05g05460.1 No alias Probable calcium-binding protein CML22 OS=Arabidopsis... 0.05 Archaeplastida
Pp3c16_16010V3.1 No alias Calcium-binding EF-hand family protein 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003855 3-dehydroquinate dehydratase activity IEP Neighborhood
MF GO:0004764 shikimate 3-dehydrogenase (NADP+) activity IEP Neighborhood
MF GO:0005215 transporter activity IEP Neighborhood
BP GO:0006813 potassium ion transport IEP Neighborhood
MF GO:0015077 monovalent inorganic cation transmembrane transporter activity IEP Neighborhood
MF GO:0015079 potassium ion transmembrane transporter activity IEP Neighborhood
BP GO:0015672 monovalent inorganic cation transport IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Neighborhood
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Neighborhood
MF GO:0016835 carbon-oxygen lyase activity IEP Neighborhood
MF GO:0016836 hydro-lyase activity IEP Neighborhood
MF GO:0022857 transmembrane transporter activity IEP Neighborhood
BP GO:0034220 ion transmembrane transport IEP Neighborhood
MF GO:0046873 metal ion transmembrane transporter activity IEP Neighborhood
BP GO:0055085 transmembrane transport IEP Neighborhood
BP GO:0071804 cellular potassium ion transport IEP Neighborhood
BP GO:0071805 potassium ion transmembrane transport IEP Neighborhood
BP GO:0098655 cation transmembrane transport IEP Neighborhood
BP GO:0098660 inorganic ion transmembrane transport IEP Neighborhood
BP GO:0098662 inorganic cation transmembrane transport IEP Neighborhood
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 145 210
IPR002048 EF_hand_dom 57 117
No external refs found!