LOC_Os06g41790.1

Description : Probable RNA-binding protein ARP1 OS=Arabidopsis thaliana (sp|q9m1s3|arp1_arath : 106.0)

Gene families : OG0000639 (Archaeplastida) Phylogenetic Tree(s): OG0000639_tree ,
OG_05_0000548 (LandPlants) Phylogenetic Tree(s): OG_05_0000548_tree ,
OG_06_0000334 (SeedPlants) Phylogenetic Tree(s): OG_06_0000334_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os06g41790.1
Cluster	HCCA: Cluster_332

Target	Alias	Description	ECC score	Gene Family Method
Pp3c10_3350V3.1	No alias	RNA-binding (RRM/RBD/RNP motifs) family protein	0.02	Archaeplastida
Smo100311	No alias	Probable RNA-binding protein ARP1 OS=Arabidopsis thaliana	0.04	Archaeplastida
Solyc04g049920.4.1	No alias	Probable RNA-binding protein ARP1 OS=Arabidopsis...	0.02	Archaeplastida
Zm00001e015636_P001	No alias	Probable RNA-binding protein ARP1 OS=Arabidopsis...	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0004721	phosphoprotein phosphatase activity	IEP	Neighborhood
MF	GO:0008138	protein tyrosine/serine/threonine phosphatase activity	IEP	Neighborhood
BP	GO:0016311	dephosphorylation	IEP	Neighborhood
MF	GO:0016788	hydrolase activity, acting on ester bonds	IEP	Neighborhood
MF	GO:0016791	phosphatase activity	IEP	Neighborhood
MF	GO:0042578	phosphoric ester hydrolase activity	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR000504	RRM_dom	35	90

External Links

No external refs found!