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  5. LOC_Os06g41980.1

LOC_Os06g41980.1


Description : protein kinase (LysM)


Gene families : OG0001523 (Archaeplastida) Phylogenetic Tree(s): OG0001523_tree ,
OG_05_0000985 (LandPlants) Phylogenetic Tree(s): OG_05_0000985_tree ,
OG_06_0001825 (SeedPlants) Phylogenetic Tree(s): OG_06_0001825_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os06g41980.1
Cluster HCCA: Cluster_305

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00022p00063910 evm_27.TU.AmTr_v1... External stimuli response.biotic... 0.04 Archaeplastida
AT2G23770 No alias protein kinase family protein / peptidoglycan-binding... 0.02 Archaeplastida
AT2G33580 No alias Protein kinase superfamily protein 0.04 Archaeplastida
GSVIVT01013461001 No alias Protein modification.phosphorylation.TKL kinase... 0.05 Archaeplastida
GSVIVT01019038001 No alias External stimuli response.biotic... 0.04 Archaeplastida
Gb_09697 No alias protein kinase (LysM). LysM receptor kinase (NFR1/LYK3) 0.03 Archaeplastida
Gb_20450 No alias protein kinase (LysM). LysM receptor kinase (NFR5/NFP) 0.03 Archaeplastida
Gb_32753 No alias protein kinase (LysM) 0.02 Archaeplastida
LOC_Os02g09960.1 No alias protein kinase (LysM). LysM receptor kinase (NFR1/LYK3) 0.03 Archaeplastida
MA_112604g0010 No alias protein kinase (LysM). LysM receptor kinase (NFR1/LYK3) 0.02 Archaeplastida
MA_159816g0020 No alias protein kinase (LysM). LysM receptor kinase (NFR1/LYK3) 0.03 Archaeplastida
MA_168820g0010 No alias protein kinase (LysM). LysM receptor kinase (NFR1/LYK3) 0.03 Archaeplastida
MA_793381g0010 No alias protein kinase (LysM). LysM receptor kinase (NFR5/NFP) 0.02 Archaeplastida
MA_892990g0010 No alias protein kinase (LysM). LysM receptor kinase (NFR5/NFP) 0.03 Archaeplastida
Mp8g11780.1 No alias protein kinase (LysM) 0.03 Archaeplastida
Pp3c7_26350V3.1 No alias protein kinase family protein / peptidoglycan-binding... 0.02 Archaeplastida
Solyc09g083200.4.1 No alias protein kinase (LysM) 0.01 Archaeplastida
Solyc09g083210.3.1 No alias protein kinase (LysM). LysM receptor kinase (NFR5/NFP) 0.05 Archaeplastida
Zm00001e014106_P001 No alias protein kinase (LysM). LysM receptor kinase (NFR1/LYK3) 0.05 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0004672 protein kinase activity IEA Interproscan
BP GO:0006468 protein phosphorylation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Neighborhood
MF GO:0001871 pattern binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity IEP Neighborhood
MF GO:0005215 transporter activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0006694 steroid biosynthetic process IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
BP GO:0008202 steroid metabolic process IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
MF GO:0015276 ligand-gated ion channel activity IEP Neighborhood
MF GO:0016229 steroid dehydrogenase activity IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
MF GO:0022834 ligand-gated channel activity IEP Neighborhood
MF GO:0022857 transmembrane transporter activity IEP Neighborhood
MF GO:0030246 carbohydrate binding IEP Neighborhood
MF GO:0030247 polysaccharide binding IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
MF GO:0033764 steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
MF GO:0043565 sequence-specific DNA binding IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR001245 Ser-Thr/Tyr_kinase_cat_dom 405 647
No external refs found!