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  5. LOC_Os06g42490.1

LOC_Os06g42490.1


Description : no hits & (original description: none)


Gene families : OG0008880 (Archaeplastida) Phylogenetic Tree(s): OG0008880_tree ,
OG_05_0008590 (LandPlants) Phylogenetic Tree(s): OG_05_0008590_tree ,
OG_06_0004395 (SeedPlants) Phylogenetic Tree(s): OG_06_0004395_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os06g42490.1
Cluster HCCA: Cluster_151

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00018p00222050 evm_27.TU.AmTr_v1... No description available 0.02 Archaeplastida
AMTR_s00070p00141920 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AT4G24200 No alias Transcription elongation factor (TFIIS) family protein 0.05 Archaeplastida
GSVIVT01009936001 No alias No description available 0.03 Archaeplastida
GSVIVT01024041001 No alias No description available 0.07 Archaeplastida
MA_33300g0010 No alias no hits & (original description: none) 0.05 Archaeplastida
Zm00001e013353_P001 No alias no hits & (original description: none) 0.06 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000123 histone acetyltransferase complex IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
MF GO:0005516 calmodulin binding IEP Neighborhood
MF GO:0005543 phospholipid binding IEP Neighborhood
BP GO:0016579 protein deubiquitination IEP Neighborhood
CC GO:0031248 protein acetyltransferase complex IEP Neighborhood
MF GO:0035091 phosphatidylinositol binding IEP Neighborhood
CC GO:0044451 nucleoplasm part IEP Neighborhood
CC GO:0070461 SAGA-type complex IEP Neighborhood
BP GO:0070646 protein modification by small protein removal IEP Neighborhood
CC GO:1902493 acetyltransferase complex IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!