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  5. AMTR_s00007p00247530

AMTR_s00007p00247530 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00007.272

No description available


Gene families : OG0001310 (Archaeplastida) Phylogenetic Tree(s): OG0001310_tree ,
OG_05_0000853 (LandPlants) Phylogenetic Tree(s): OG_05_0000853_tree ,
OG_06_0000547 (SeedPlants) Phylogenetic Tree(s): OG_06_0000547_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00007p00247530
Cluster HCCA: Cluster_88

Target Alias Description ECC score Gene Family Method Actions
AT5G37478 No alias TPX2 (targeting protein for Xklp2) protein family 0.04 Archaeplastida
GSVIVT01026314001 No alias No description available 0.03 Archaeplastida
GSVIVT01026315001 No alias No description available 0.04 Archaeplastida
LOC_Os09g13650.1 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_2263g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
Solyc04g014550.3.1 No alias no hits & (original description: none) 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP Neighborhood
MF GO:0004674 protein serine/threonine kinase activity IEP Neighborhood
MF GO:0015018 galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity IEP Neighborhood
MF GO:0015020 glucuronosyltransferase activity IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0016706 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
MF GO:0050662 coenzyme binding IEP Neighborhood
MF GO:0051213 dioxygenase activity IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
InterPro domains Description Start Stop
IPR027329 TPX2_C 105 161
No external refs found!