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  5. AMTR_s00007p00247780

AMTR_s00007p00247780 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00007.273

No description available


Gene families : OG0005174 (Archaeplastida) Phylogenetic Tree(s): OG0005174_tree ,
OG_05_0004239 (LandPlants) Phylogenetic Tree(s): OG_05_0004239_tree ,
OG_06_0004422 (SeedPlants) Phylogenetic Tree(s): OG_06_0004422_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00007p00247780
Cluster HCCA: Cluster_218

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01009819001 No alias No description available 0.02 Archaeplastida
LOC_Os03g58640.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Pp3c11_17150V3.1 No alias Forkhead-associated (FHA) domain-containing protein 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Neighborhood
BP GO:0000375 RNA splicing, via transesterification reactions IEP Neighborhood
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Neighborhood
BP GO:0000398 mRNA splicing, via spliceosome IEP Neighborhood
MF GO:0001882 nucleoside binding IEP Neighborhood
MF GO:0001883 purine nucleoside binding IEP Neighborhood
MF GO:0003922 GMP synthase (glutamine-hydrolyzing) activity IEP Neighborhood
MF GO:0005525 GTP binding IEP Neighborhood
CC GO:0005681 spliceosomal complex IEP Neighborhood
BP GO:0006177 GMP biosynthetic process IEP Neighborhood
BP GO:0006397 mRNA processing IEP Neighborhood
BP GO:0008380 RNA splicing IEP Neighborhood
BP GO:0009116 nucleoside metabolic process IEP Neighborhood
BP GO:0009119 ribonucleoside metabolic process IEP Neighborhood
BP GO:0009163 nucleoside biosynthetic process IEP Neighborhood
BP GO:0016071 mRNA metabolic process IEP Neighborhood
MF GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor IEP Neighborhood
MF GO:0019001 guanyl nucleotide binding IEP Neighborhood
MF GO:0032549 ribonucleoside binding IEP Neighborhood
MF GO:0032550 purine ribonucleoside binding IEP Neighborhood
MF GO:0032561 guanyl ribonucleotide binding IEP Neighborhood
BP GO:0034404 nucleobase-containing small molecule biosynthetic process IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
BP GO:0042278 purine nucleoside metabolic process IEP Neighborhood
BP GO:0042451 purine nucleoside biosynthetic process IEP Neighborhood
BP GO:0042455 ribonucleoside biosynthetic process IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
BP GO:0046037 GMP metabolic process IEP Neighborhood
BP GO:0046128 purine ribonucleoside metabolic process IEP Neighborhood
BP GO:0046129 purine ribonucleoside biosynthetic process IEP Neighborhood
MF GO:0051287 NAD binding IEP Neighborhood
MF GO:0070403 NAD+ binding IEP Neighborhood
BP GO:1901068 guanosine-containing compound metabolic process IEP Neighborhood
BP GO:1901070 guanosine-containing compound biosynthetic process IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
BP GO:1901657 glycosyl compound metabolic process IEP Neighborhood
BP GO:1901659 glycosyl compound biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR025999 MCRS_N 6 73
IPR000253 FHA_dom 809 881
No external refs found!