Description : formamidopyrimidine-DNA glycosylase (FPG1)
Gene families : OG0003806 (Archaeplastida) Phylogenetic Tree(s): OG0003806_tree ,
OG_05_0004351 (LandPlants) Phylogenetic Tree(s): OG_05_0004351_tree ,
OG_06_0004745 (SeedPlants) Phylogenetic Tree(s): OG_06_0004745_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: LOC_Os06g43610.1 | |
Cluster | HCCA: Cluster_348 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Mp2g07760.1 | No alias | formamidopyrimidine-DNA glycosylase (FPG1) | 0.02 | Archaeplastida | |
Solyc03g117510.4.1 | No alias | formamidopyrimidine-DNA glycosylase (FPG1) | 0.02 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003684 | damaged DNA binding | IEA | Interproscan |
MF | GO:0003906 | DNA-(apurinic or apyrimidinic site) endonuclease activity | IEA | Interproscan |
BP | GO:0006284 | base-excision repair | IEA | Interproscan |
BP | GO:0006289 | nucleotide-excision repair | IEA | Interproscan |
MF | GO:0008270 | zinc ion binding | IEA | Interproscan |
MF | GO:0016799 | hydrolase activity, hydrolyzing N-glycosyl compounds | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003678 | DNA helicase activity | IEP | Neighborhood |
MF | GO:0004812 | aminoacyl-tRNA ligase activity | IEP | Neighborhood |
BP | GO:0006325 | chromatin organization | IEP | Neighborhood |
BP | GO:0006334 | nucleosome assembly | IEP | Neighborhood |
BP | GO:0006418 | tRNA aminoacylation for protein translation | IEP | Neighborhood |
MF | GO:0016875 | ligase activity, forming carbon-oxygen bonds | IEP | Neighborhood |
BP | GO:0022607 | cellular component assembly | IEP | Neighborhood |
BP | GO:0034622 | cellular protein-containing complex assembly | IEP | Neighborhood |
BP | GO:0034728 | nucleosome organization | IEP | Neighborhood |
MF | GO:0042393 | histone binding | IEP | Neighborhood |
BP | GO:0043038 | amino acid activation | IEP | Neighborhood |
BP | GO:0043039 | tRNA aminoacylation | IEP | Neighborhood |
BP | GO:0043933 | protein-containing complex subunit organization | IEP | Neighborhood |
BP | GO:0065003 | protein-containing complex assembly | IEP | Neighborhood |
BP | GO:0065004 | protein-DNA complex assembly | IEP | Neighborhood |
BP | GO:0071824 | protein-DNA complex subunit organization | IEP | Neighborhood |
No external refs found! |