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LOC_Os06g44540.1


Description : (R)-mandelonitrile lyase-like OS=Arabidopsis thaliana (sp|q9ssm2|mdll_arath : 394.0)


Gene families : OG0000176 (Archaeplastida) Phylogenetic Tree(s): OG0000176_tree ,
OG_05_0010927 (LandPlants) Phylogenetic Tree(s): OG_05_0010927_tree ,
OG_06_0007616 (SeedPlants) Phylogenetic Tree(s): OG_06_0007616_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os06g44540.1
Cluster HCCA: Cluster_234

Target Alias Description ECC score Gene Family Method Actions
AT1G72970 EDA17, HTH Glucose-methanol-choline (GMC) oxidoreductase family protein 0.05 Archaeplastida
Gb_00808 No alias (R)-mandelonitrile lyase-like OS=Arabidopsis thaliana... 0.02 Archaeplastida
Gb_19558 No alias (R)-mandelonitrile lyase-like OS=Arabidopsis thaliana... 0.03 Archaeplastida
Gb_28422 No alias (R)-mandelonitrile lyase-like OS=Arabidopsis thaliana... 0.03 Archaeplastida
Gb_30675 No alias Protein HOTHEAD OS=Arabidopsis thaliana... 0.02 Archaeplastida
Gb_38452 No alias Protein HOTHEAD OS=Arabidopsis thaliana... 0.02 Archaeplastida
Gb_39928 No alias Protein HOTHEAD OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_3247g0010 No alias (R)-mandelonitrile lyase 1 OS=Prunus serotina... 0.02 Archaeplastida
Pp3c9_16990V3.1 No alias Glucose-methanol-choline (GMC) oxidoreductase family protein 0.02 Archaeplastida
Smo112603 No alias (R)-mandelonitrile lyase-like OS=Arabidopsis thaliana 0.02 Archaeplastida
Smo404769 No alias (R)-mandelonitrile lyase-like OS=Arabidopsis thaliana 0.02 Archaeplastida
Smo429523 No alias Protein HOTHEAD OS=Arabidopsis thaliana 0.03 Archaeplastida
Zm00001e002156_P001 No alias Protein HOTHEAD OS=Arabidopsis thaliana... 0.03 Archaeplastida
Zm00001e030422_P001 No alias (R)-mandelonitrile lyase-like OS=Arabidopsis thaliana... 0.04 Archaeplastida
Zm00001e033949_P001 No alias omega-hydroxy fatty acyl dehydrogenase 0.06 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEA Interproscan
MF GO:0050660 flavin adenine dinucleotide binding IEA Interproscan
BP GO:0055114 oxidation-reduction process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003887 DNA-directed DNA polymerase activity IEP Neighborhood
MF GO:0005215 transporter activity IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0006810 transport IEP Neighborhood
BP GO:0006811 ion transport IEP Neighborhood
BP GO:0006812 cation transport IEP Neighborhood
BP GO:0006813 potassium ion transport IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
BP GO:0008380 RNA splicing IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
MF GO:0015079 potassium ion transmembrane transporter activity IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
MF GO:0022857 transmembrane transporter activity IEP Neighborhood
BP GO:0030001 metal ion transport IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
MF GO:0034061 DNA polymerase activity IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
MF GO:0043565 sequence-specific DNA binding IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051179 localization IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0055085 transmembrane transport IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0071804 cellular potassium ion transport IEP Neighborhood
BP GO:0071805 potassium ion transmembrane transport IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR000172 GMC_OxRdtase_N 55 348
IPR007867 GMC_OxRtase_C 419 566
No external refs found!