1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os06g44890.1

LOC_Os06g44890.1


Description : villin actin-crosslinking factor


Gene families : OG0000669 (Archaeplastida) Phylogenetic Tree(s): OG0000669_tree ,
OG_05_0000929 (LandPlants) Phylogenetic Tree(s): OG_05_0000929_tree ,
OG_06_0002995 (SeedPlants) Phylogenetic Tree(s): OG_06_0002995_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os06g44890.1
Cluster HCCA: Cluster_206

Target Alias Description ECC score Gene Family Method Actions
AT4G30160 VLN4, ATVLN4 villin 4 0.03 Archaeplastida
GSVIVT01024752001 No alias Cytoskeleton.microfilament network.actin... 0.02 Archaeplastida
GSVIVT01029237001 No alias Cytoskeleton.microfilament network.actin... 0.04 Archaeplastida
GSVIVT01033261001 No alias Cytoskeleton.microfilament network.actin... 0.05 Archaeplastida
Gb_23115 No alias villin actin-crosslinking factor 0.04 Archaeplastida
Gb_23117 No alias villin actin-crosslinking factor 0.02 Archaeplastida
Gb_25295 No alias villin actin-crosslinking factor 0.03 Archaeplastida
Gb_29105 No alias villin actin-crosslinking factor 0.02 Archaeplastida
Gb_29107 No alias villin actin-crosslinking factor 0.02 Archaeplastida
Gb_31397 No alias villin actin-crosslinking factor 0.02 Archaeplastida
LOC_Os04g51440.1 No alias villin actin-crosslinking factor 0.02 Archaeplastida
LOC_Os08g14230.1 No alias villin actin-crosslinking factor 0.04 Archaeplastida
MA_10429481g0030 No alias villin actin-crosslinking factor 0.05 Archaeplastida
MA_10430359g0030 No alias Villin-2 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
MA_10430359g0040 No alias villin actin-crosslinking factor 0.02 Archaeplastida
MA_8786484g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_9118625g0010 No alias no hits & (original description: none) 0.05 Archaeplastida
Mp1g24640.1 No alias villin actin-crosslinking factor 0.03 Archaeplastida
Solyc02g021420.3.1 No alias villin actin-crosslinking factor 0.06 Archaeplastida
Solyc04g015830.3.1 No alias villin actin-crosslinking factor 0.02 Archaeplastida
Zm00001e028314_P001 No alias villin actin-crosslinking factor 0.02 Archaeplastida
Zm00001e031068_P001 No alias villin actin-crosslinking factor 0.05 Archaeplastida
Zm00001e037689_P003 No alias villin actin-crosslinking factor 0.04 Archaeplastida
Zm00001e038175_P001 No alias villin actin-crosslinking factor 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEA Interproscan
BP GO:0007010 cytoskeleton organization IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003774 motor activity IEP Neighborhood
BP GO:0009719 response to endogenous stimulus IEP Neighborhood
BP GO:0009725 response to hormone IEP Neighborhood
BP GO:0010033 response to organic substance IEP Neighborhood
CC GO:0016459 myosin complex IEP Neighborhood
BP GO:0042221 response to chemical IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044430 cytoskeletal part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
InterPro domains Description Start Stop
IPR007123 Gelsolin-like_dom 319 385
IPR007123 Gelsolin-like_dom 462 530
IPR007123 Gelsolin-like_dom 582 622
IPR007123 Gelsolin-like_dom 197 265
IPR007123 Gelsolin-like_dom 77 157
IPR007123 Gelsolin-like_dom 689 760
IPR003128 Villin_headpiece 981 1016
No external refs found!