1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os06g45580.1

LOC_Os06g45580.1


Description : RING-H2 finger protein ATL73 OS=Arabidopsis thaliana (sp|q9flc6|atl73_arath : 97.8)


Gene families : OG0000004 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000003 (LandPlants) Phylogenetic Tree(s): OG_05_0000003_tree ,
OG_06_0000216 (SeedPlants) Phylogenetic Tree(s): OG_06_0000216_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os06g45580.1
Cluster HCCA: Cluster_85

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00021p00161170 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
AT1G49200 No alias RING/U-box superfamily protein 0.03 Archaeplastida
AT1G49210 No alias RING/U-box superfamily protein 0.03 Archaeplastida
AT1G49230 No alias RING/U-box superfamily protein 0.03 Archaeplastida
AT1G67856 No alias RING/U-box superfamily protein 0.04 Archaeplastida
AT1G76410 ATL8 RING/U-box superfamily protein 0.03 Archaeplastida
AT2G01150 RHA2B RING-H2 finger protein 2B 0.03 Archaeplastida
AT2G17450 RHA3A RING-H2 finger A3A 0.04 Archaeplastida
AT2G37580 No alias RING/U-box superfamily protein 0.06 Archaeplastida
AT3G05200 ATL6 RING/U-box superfamily protein 0.03 Archaeplastida
AT3G18773 No alias RING/U-box superfamily protein 0.03 Archaeplastida
AT3G60966 No alias RING/U-box superfamily protein 0.02 Archaeplastida
AT4G00305 No alias RING/U-box superfamily protein 0.03 Archaeplastida
AT4G35840 No alias RING/U-box superfamily protein 0.04 Archaeplastida
AT4G38140 No alias RING/U-box superfamily protein 0.03 Archaeplastida
AT5G01880 No alias RING/U-box superfamily protein 0.03 Archaeplastida
AT5G17600 No alias RING/U-box superfamily protein 0.03 Archaeplastida
AT5G27420 ATL31, CNI1 carbon/nitrogen insensitive 1 0.02 Archaeplastida
GSVIVT01000015001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.04 Archaeplastida
GSVIVT01012015001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.05 Archaeplastida
GSVIVT01012022001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
GSVIVT01020210001 No alias No description available 0.03 Archaeplastida
GSVIVT01030125001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
GSVIVT01032684001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.04 Archaeplastida
Gb_14775 No alias RING-H2 finger protein ATL78 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Gb_14777 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Gb_15836 No alias RING-H2-class E3 ligase 0.05 Archaeplastida
Gb_28973 No alias Probable E3 ubiquitin-protein ligase RHA1A... 0.02 Archaeplastida
Gb_28980 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os01g11460.1 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
LOC_Os01g11480.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
LOC_Os02g46340.1 No alias E3 ubiquitin-protein ligase ATL4 OS=Arabidopsis thaliana... 0.04 Archaeplastida
LOC_Os03g05570.1 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
LOC_Os05g39260.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os08g38460.1 No alias ubiquitin protein ligase (XERICO) 0.04 Archaeplastida
LOC_Os08g43670.1 No alias NEP1-interacting protein 2 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os09g29310.1 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
LOC_Os12g02220.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os12g24490.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
MA_10021g0010 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
MA_10208579g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_10426834g0010 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
MA_10429091g0010 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
MA_214717g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_373963g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_43543g0010 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
MA_51630g0010 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
MA_5319g0010 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
MA_611616g0010 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
MA_6931619g0010 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
MA_8556123g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
Mp1g19680.1 No alias NEP1-interacting protein-like 2 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Pp3c14_14600V3.1 No alias RING/U-box superfamily protein 0.02 Archaeplastida
Pp3c1_32230V3.1 No alias RING/U-box superfamily protein 0.04 Archaeplastida
Pp3c1_9560V3.1 No alias TOXICOS EN LEVADURA 2 0.03 Archaeplastida
Pp3c23_1651V3.1 No alias RING/U-box superfamily protein 0.03 Archaeplastida
Smo109459 No alias Protein degradation.peptide tagging.Ubiquitin... 0.04 Archaeplastida
Smo96681 No alias Protein degradation.peptide tagging.Ubiquitin... 0.05 Archaeplastida
Solyc03g114190.1.1 No alias RING-H2 finger protein ATL56 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Solyc06g053640.1.1 No alias RING-H2-class E3 ligase 0.05 Archaeplastida
Solyc09g075320.1.1 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
Solyc11g005310.1.1 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
Solyc11g066510.3.1 No alias RING-H2-class E3 ligase 0.08 Archaeplastida
Zm00001e000398_P001 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Zm00001e002430_P001 No alias no hits & (original description: none) 0.09 Archaeplastida
Zm00001e007103_P001 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Zm00001e007129_P001 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Zm00001e007956_P001 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Zm00001e010787_P001 No alias RING-H2 finger protein ATL3 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Zm00001e011306_P001 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Zm00001e013809_P001 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e014764_P001 No alias RING-H2 finger protein ATL72 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Zm00001e015470_P001 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Zm00001e015495_P001 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Zm00001e015905_P001 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Zm00001e017509_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e017960_P001 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e018028_P001 No alias RING-H2-class E3 ligase 0.05 Archaeplastida
Zm00001e021729_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e022742_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e023234_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e023260_P001 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
Zm00001e029032_P001 No alias RING-H2-class E3 ligase 0.06 Archaeplastida
Zm00001e031874_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e032186_P001 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e034469_P001 No alias ubiquitin protein ligase (XERICO) 0.05 Archaeplastida
Zm00001e035560_P001 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Zm00001e037107_P001 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
Zm00001e038229_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e041385_P001 No alias RING-H2-class E3 ligase 0.05 Archaeplastida
Zm00001e041409_P001 No alias no hits & (original description: none) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0008080 N-acetyltransferase activity IEP Neighborhood
MF GO:0016407 acetyltransferase activity IEP Neighborhood
MF GO:0016410 N-acyltransferase activity IEP Neighborhood
InterPro domains Description Start Stop
IPR001841 Znf_RING 111 153
No external refs found!