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AT1G30730


Description : FAD-binding Berberine family protein


Gene families : OG0000172 (Archaeplastida) Phylogenetic Tree(s): OG0000172_tree ,
OG_05_0000076 (LandPlants) Phylogenetic Tree(s): OG_05_0000076_tree ,
OG_06_0000069 (SeedPlants) Phylogenetic Tree(s): OG_06_0000069_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G30730
Cluster HCCA: Cluster_234

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00018p00124850 evm_27.TU.AmTr_v1... Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.02 Archaeplastida
AMTR_s00032p00227420 evm_27.TU.AmTr_v1... Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.02 Archaeplastida
AMTR_s00038p00162870 evm_27.TU.AmTr_v1... Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.06 Archaeplastida
AT1G26380 No alias FAD-binding Berberine family protein 0.04 Archaeplastida
AT1G26410 No alias FAD-binding Berberine family protein 0.05 Archaeplastida
AT1G26420 No alias FAD-binding Berberine family protein 0.05 Archaeplastida
AT4G20830 No alias FAD-binding Berberine family protein 0.04 Archaeplastida
AT5G44380 No alias FAD-binding Berberine family protein 0.03 Archaeplastida
AT5G44390 No alias FAD-binding Berberine family protein 0.03 Archaeplastida
AT5G44440 No alias FAD-binding Berberine family protein 0.03 Archaeplastida
GSVIVT01021720001 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.06 Archaeplastida
GSVIVT01021723001 No alias Berberine bridge enzyme-like 11 OS=Arabidopsis thaliana 0.04 Archaeplastida
GSVIVT01021739001 No alias Berberine bridge enzyme-like 19 OS=Arabidopsis thaliana 0.06 Archaeplastida
Gb_03609 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.03 Archaeplastida
Gb_21185 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.07 Archaeplastida
Gb_21186 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.05 Archaeplastida
Gb_24415 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.02 Archaeplastida
LOC_Os06g35560.1 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.02 Archaeplastida
LOC_Os06g35630.1 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.03 Archaeplastida
LOC_Os08g06190.1 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.03 Archaeplastida
LOC_Os10g21690.1 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.02 Archaeplastida
LOC_Os11g30310.1 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.04 Archaeplastida
MA_10144220g0010 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.02 Archaeplastida
MA_10427412g0010 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.03 Archaeplastida
MA_186285g0010 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.02 Archaeplastida
MA_26891g0010 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.02 Archaeplastida
MA_5468901g0010 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.03 Archaeplastida
MA_613919g0010 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.03 Archaeplastida
MA_8334627g0010 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.04 Archaeplastida
Mp6g20430.1 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.02 Archaeplastida
Pp3c12_2640V3.1 No alias FAD-binding Berberine family protein 0.03 Archaeplastida
Solyc02g022850.1.1 No alias Berberine bridge enzyme-like 21 OS=Arabidopsis thaliana... 0.06 Archaeplastida
Solyc02g070090.1.1 No alias Berberine bridge enzyme-like 8 OS=Arabidopsis thaliana... 0.05 Archaeplastida
Solyc02g070110.1.1 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.07 Archaeplastida
Solyc02g070130.1.1 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.07 Archaeplastida
Solyc02g070160.1.1 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.02 Archaeplastida
Solyc02g079440.3.1 No alias Berberine bridge enzyme-like 22 OS=Arabidopsis thaliana... 0.07 Archaeplastida
Solyc06g065060.1.1 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.07 Archaeplastida
Solyc09g072660.4.1 No alias Berberine bridge enzyme-like 13 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Zm00001e030681_P001 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.02 Archaeplastida
Zm00001e037256_P001 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.04 Archaeplastida
Zm00001e040211_P001 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.04 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0005737 cytoplasm ISM Interproscan
MF GO:0009055 electron transfer activity ISS Interproscan
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Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP Neighborhood
CC GO:0005576 extracellular region IEP Neighborhood
BP GO:0006811 ion transport IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0009608 response to symbiont IEP Neighborhood
BP GO:0009610 response to symbiotic fungus IEP Neighborhood
BP GO:0009733 response to auxin IEP Neighborhood
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP Neighborhood
MF GO:0016656 monodehydroascorbate reductase (NADH) activity IEP Neighborhood
MF GO:0016831 carboxy-lyase activity IEP Neighborhood
BP GO:0036294 cellular response to decreased oxygen levels IEP Neighborhood
BP GO:0042343 indole glucosinolate metabolic process IEP Neighborhood
BP GO:0043903 regulation of symbiosis, encompassing mutualism through parasitism IEP Neighborhood
BP GO:0071453 cellular response to oxygen levels IEP Neighborhood
BP GO:0071456 cellular response to hypoxia IEP Neighborhood
InterPro domains Description Start Stop
IPR006094 Oxid_FAD_bind_N 76 211
IPR012951 BBE 468 523
No external refs found!