1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os06g46754.1

LOC_Os06g46754.1


Description : GTPase effector (RIC)


Gene families : OG0001059 (Archaeplastida) Phylogenetic Tree(s): OG0001059_tree ,
OG_05_0000659 (LandPlants) Phylogenetic Tree(s): OG_05_0000659_tree ,
OG_06_0000439 (SeedPlants) Phylogenetic Tree(s): OG_06_0000439_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os06g46754.1
Cluster HCCA: Cluster_246

Target Alias Description ECC score Gene Family Method Actions
AT1G27380 RIC2 ROP-interactive CRIB motif-containing protein 2 0.04 Archaeplastida
AT1G61795 No alias PAK-box/P21-Rho-binding family protein 0.08 Archaeplastida
AT4G21745 No alias PAK-box/P21-Rho-binding family protein 0.06 Archaeplastida
AT5G16490 RIC4 ROP-interactive CRIB motif-containing protein 4 0.09 Archaeplastida
GSVIVT01019115001 No alias Multi-process regulation.Rop GTPase regulatory... 0.07 Archaeplastida
GSVIVT01027848001 No alias Multi-process regulation.Rop GTPase regulatory... 0.02 Archaeplastida
GSVIVT01031660001 No alias Multi-process regulation.Rop GTPase regulatory... 0.03 Archaeplastida
Gb_05134 No alias GTPase effector (RIC) 0.04 Archaeplastida
LOC_Os02g06660.1 No alias GTPase effector (RIC) 0.06 Archaeplastida
LOC_Os03g63060.1 No alias GTPase effector (RIC) 0.04 Archaeplastida
LOC_Os11g28310.1 No alias GTPase effector (RIC) 0.04 Archaeplastida
MA_698612g0010 No alias GTPase effector (RIC) 0.04 Archaeplastida
Solyc09g098425.1.1 No alias GTPase effector (RIC) 0.02 Archaeplastida
Solyc11g008880.2.1 No alias GTPase effector (RIC) 0.05 Archaeplastida
Zm00001e013704_P001 No alias no hits & (original description: none) 0.06 Archaeplastida
Zm00001e021470_P001 No alias GTPase effector (RIC) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0001882 nucleoside binding IEP Neighborhood
MF GO:0001883 purine nucleoside binding IEP Neighborhood
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0003924 GTPase activity IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
MF GO:0004601 peroxidase activity IEP Neighborhood
MF GO:0005506 iron ion binding IEP Neighborhood
MF GO:0005525 GTP binding IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
BP GO:0006979 response to oxidative stress IEP Neighborhood
BP GO:0009719 response to endogenous stimulus IEP Neighborhood
BP GO:0009725 response to hormone IEP Neighborhood
BP GO:0009733 response to auxin IEP Neighborhood
BP GO:0010033 response to organic substance IEP Neighborhood
MF GO:0016209 antioxidant activity IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0016746 transferase activity, transferring acyl groups IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
MF GO:0019001 guanyl nucleotide binding IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
MF GO:0032549 ribonucleoside binding IEP Neighborhood
MF GO:0032550 purine ribonucleoside binding IEP Neighborhood
MF GO:0032561 guanyl ribonucleotide binding IEP Neighborhood
BP GO:0042221 response to chemical IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
BP GO:0050896 response to stimulus IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!