LOC_Os06g47590.1

Description : no hits & (original description: none)

Gene families : OG0000003 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000001 (LandPlants) Phylogenetic Tree(s): OG_05_0000001_tree ,
OG_06_0015419 (SeedPlants) Phylogenetic Tree(s): OG_06_0015419_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os06g47590.1
Cluster	HCCA: Cluster_355

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00111p00051610	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
AMTR_s00111p00113030	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
AT1G22190	No alias	Integrase-type DNA-binding superfamily protein	0.02	Archaeplastida
AT1G22985	No alias	Integrase-type DNA-binding superfamily protein	0.02	Archaeplastida
AT1G28370	ATERF11, ERF11	ERF domain protein 11	0.02	Archaeplastida
AT1G50640	ATERF3, ERF3	ethylene responsive element binding factor 3	0.03	Archaeplastida
AT2G44840	ATERF13, ERF13, EREBP	ethylene-responsive element binding factor 13	0.03	Archaeplastida
AT3G15210	ATERF4, RAP2.5,...	ethylene responsive element binding factor 4	0.03	Archaeplastida
AT4G17500	ERF-1, ATERF-1	ethylene responsive element binding factor 1	0.02	Archaeplastida
AT4G34410	RRTF1	redox responsive transcription factor 1	0.03	Archaeplastida
Cre14.g620500	No alias	No description available	0.01	Archaeplastida
Gb_01213	No alias	transcription factor (DREB)	0.02	Archaeplastida
Gb_41609	No alias	transcription factor (DREB)	0.03	Archaeplastida
LOC_Os04g52090.1	No alias	transcription factor (ERF)	0.04	Archaeplastida
LOC_Os04g57340.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
LOC_Os05g41780.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
LOC_Os09g20350.1	No alias	transcription factor (DREB)	0.04	Archaeplastida
MA_113446g0010	No alias	transcription factor (DREB)	0.03	Archaeplastida
MA_18454g0020	No alias	transcription factor (ERF)	0.03	Archaeplastida
Pp3c10_11910V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.04	Archaeplastida
Pp3c16_3770V3.1	No alias	erf domain protein 9	0.02	Archaeplastida
Pp3c27_1350V3.1	No alias	ERF domain protein 12	0.02	Archaeplastida
Solyc02g093130.3.1	No alias	transcription factor (DREB)	0.06	Archaeplastida
Solyc03g093540.1.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
Solyc06g035700.1.1	No alias	transcription factor (DREB)	0.03	Archaeplastida
Solyc07g053740.1.1	No alias	transcription factor (ERF)	0.02	Archaeplastida
Solyc08g078190.2.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
Solyc10g006130.1.1	No alias	transcription factor (ERF)	0.02	Archaeplastida
Solyc10g009110.1.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
Zm00001e007352_P001	No alias	transcription factor (ERF)	0.03	Archaeplastida
Zm00001e013096_P001	No alias	no hits & (original description: none)	0.05	Archaeplastida
Zm00001e013927_P001	No alias	transcription factor (ERF)	0.06	Archaeplastida
Zm00001e016421_P001	No alias	transcription factor (ERF)	0.03	Archaeplastida
Zm00001e019837_P001	No alias	no hits & (original description: none)	0.02	Archaeplastida
Zm00001e024001_P001	No alias	no hits & (original description: none)	0.06	Archaeplastida
Zm00001e025064_P001	No alias	transcription factor (ERF)	0.06	Archaeplastida
Zm00001e031438_P002	No alias	Ethylene-responsive transcription factor RAP2-3...	0.02	Archaeplastida
Zm00001e033965_P001	No alias	transcription factor (DREB)	0.08	Archaeplastida
Zm00001e038525_P001	No alias	Ethylene-responsive transcription factor ERF013...	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0000813	ESCRT I complex	IEP	Neighborhood
MF	GO:0004842	ubiquitin-protein transferase activity	IEP	Neighborhood
BP	GO:0009116	nucleoside metabolic process	IEP	Neighborhood
BP	GO:0016197	endosomal transport	IEP	Neighborhood
MF	GO:0019787	ubiquitin-like protein transferase activity	IEP	Neighborhood
BP	GO:0032509	endosome transport via multivesicular body sorting pathway	IEP	Neighborhood
CC	GO:0036452	ESCRT complex	IEP	Neighborhood
CC	GO:0044433	cytoplasmic vesicle part	IEP	Neighborhood
CC	GO:0044440	endosomal part	IEP	Neighborhood
MF	GO:0061630	ubiquitin protein ligase activity	IEP	Neighborhood
MF	GO:0061659	ubiquitin-like protein ligase activity	IEP	Neighborhood
BP	GO:0071985	multivesicular body sorting pathway	IEP	Neighborhood
BP	GO:1901657	glycosyl compound metabolic process	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	16	65

External Links

No external refs found!

LOC_Os06g47590.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation