LOC_Os06g48210.1


Description : DEAD-box ATP-dependent RNA helicase 35B OS=Oryza sativa subsp. japonica (sp|q5z6g5|rh35b_orysj : 1044.0)


Gene families : OG0005247 (Archaeplastida) Phylogenetic Tree(s): OG0005247_tree ,
OG_05_0005375 (LandPlants) Phylogenetic Tree(s): OG_05_0005375_tree ,
OG_06_0006013 (SeedPlants) Phylogenetic Tree(s): OG_06_0006013_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os06g48210.1
Cluster HCCA: Cluster_323

Target Alias Description ECC score Gene Family Method Actions
Zm00001e038223_P001 No alias DEAD-box ATP-dependent RNA helicase 35A OS=Oryza sativa... 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0004427 inorganic diphosphatase activity IEP Neighborhood
MF GO:0004470 malic enzyme activity IEP Neighborhood
MF GO:0004471 malate dehydrogenase (decarboxylating) (NAD+) activity IEP Neighborhood
MF GO:0004619 phosphoglycerate mutase activity IEP Neighborhood
CC GO:0005737 cytoplasm IEP Neighborhood
CC GO:0005739 mitochondrion IEP Neighborhood
BP GO:0005996 monosaccharide metabolic process IEP Neighborhood
BP GO:0006006 glucose metabolic process IEP Neighborhood
BP GO:0006007 glucose catabolic process IEP Neighborhood
BP GO:0006801 superoxide metabolic process IEP Neighborhood
MF GO:0008081 phosphoric diester hydrolase activity IEP Neighborhood
MF GO:0016615 malate dehydrogenase activity IEP Neighborhood
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP Neighborhood
MF GO:0016866 intramolecular transferase activity IEP Neighborhood
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP Neighborhood
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Neighborhood
BP GO:0019318 hexose metabolic process IEP Neighborhood
BP GO:0019320 hexose catabolic process IEP Neighborhood
BP GO:0019915 lipid storage IEP Neighborhood
MF GO:0030145 manganese ion binding IEP Neighborhood
BP GO:0044282 small molecule catabolic process IEP Neighborhood
BP GO:0046365 monosaccharide catabolic process IEP Neighborhood
BP GO:0051235 maintenance of location IEP Neighborhood
MF GO:0051287 NAD binding IEP Neighborhood
BP GO:0072593 reactive oxygen species metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR001650 Helicase_C 413 519
IPR011545 DEAD/DEAH_box_helicase_dom 197 376
No external refs found!