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  5. LOC_Os06g49860.1

LOC_Os06g49860.1


Description : Probable methyltransferase PMT27 OS=Arabidopsis thaliana (sp|q9sd39|pmtr_arath : 852.0)


Gene families : OG0001029 (Archaeplastida) Phylogenetic Tree(s): OG0001029_tree ,
OG_05_0000619 (LandPlants) Phylogenetic Tree(s): OG_05_0000619_tree ,
OG_06_0000806 (SeedPlants) Phylogenetic Tree(s): OG_06_0000806_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os06g49860.1
Cluster HCCA: Cluster_17

Target Alias Description ECC score Gene Family Method Actions
AT1G19430 No alias S-adenosyl-L-methionine-dependent methyltransferases... 0.03 Archaeplastida
Solyc02g084670.4.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Solyc06g051000.2.1 No alias Probable methyltransferase PMT22 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Zm00001e008978_P001 No alias Probable methyltransferase PMT26 OS=Arabidopsis thaliana... 0.07 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0008168 methyltransferase activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006886 intracellular protein transport IEP Neighborhood
MF GO:0015077 monovalent inorganic cation transmembrane transporter activity IEP Neighborhood
MF GO:0015078 proton transmembrane transporter activity IEP Neighborhood
MF GO:0015291 secondary active transmembrane transporter activity IEP Neighborhood
MF GO:0015297 antiporter activity IEP Neighborhood
MF GO:0015298 solute:cation antiporter activity IEP Neighborhood
MF GO:0015299 solute:proton antiporter activity IEP Neighborhood
CC GO:0030117 membrane coat IEP Neighborhood
CC GO:0030118 clathrin coat IEP Neighborhood
CC GO:0030120 vesicle coat IEP Neighborhood
CC GO:0030125 clathrin vesicle coat IEP Neighborhood
CC GO:0030130 clathrin coat of trans-Golgi network vesicle IEP Neighborhood
CC GO:0030132 clathrin coat of coated pit IEP Neighborhood
CC GO:0044431 Golgi apparatus part IEP Neighborhood
CC GO:0044433 cytoplasmic vesicle part IEP Neighborhood
CC GO:0044459 plasma membrane part IEP Neighborhood
BP GO:0046907 intracellular transport IEP Neighborhood
BP GO:0051649 establishment of localization in cell IEP Neighborhood
CC GO:0098797 plasma membrane protein complex IEP Neighborhood
InterPro domains Description Start Stop
IPR004159 Put_SAM_MeTrfase 414 913
No external refs found!