AMTR_s00007p00264500 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00007.350

Description : Pectinesterase PPME1 OS=Arabidopsis thaliana


Gene families : OG0013911 (Archaeplastida) Phylogenetic Tree(s): OG0013911_tree ,
OG_05_0013815 (LandPlants) Phylogenetic Tree(s): OG_05_0013815_tree ,
OG_06_0013699 (SeedPlants) Phylogenetic Tree(s): OG_06_0013699_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00007p00264500
Cluster HCCA: Cluster_112

Target Alias Description ECC score Gene Family Method Actions
MA_705050g0010 No alias pectin methylesterase 0.02 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0005618 cell wall IEA Interproscan
MF GO:0030599 pectinesterase activity IEA Interproscan
BP GO:0042545 cell wall modification IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0004180 carboxypeptidase activity IEP Neighborhood
MF GO:0004185 serine-type carboxypeptidase activity IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
MF GO:0004650 polygalacturonase activity IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
MF GO:0008236 serine-type peptidase activity IEP Neighborhood
MF GO:0008238 exopeptidase activity IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
MF GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor IEP Neighborhood
MF GO:0017171 serine hydrolase activity IEP Neighborhood
MF GO:0070008 serine-type exopeptidase activity IEP Neighborhood
InterPro domains Description Start Stop
IPR000070 Pectinesterase_cat 79 172
No external refs found!