1. Home
  2. Species
  3. Amborella trichopoda
  4. Sequence
  5. AMTR_s00007p00264610

AMTR_s00007p00264610 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00007.351

No description available


Gene families : OG0000015 (Archaeplastida) Phylogenetic Tree(s): OG0000015_tree ,
OG_05_0001083 (LandPlants) Phylogenetic Tree(s): OG_05_0001083_tree ,
OG_06_0001533 (SeedPlants) Phylogenetic Tree(s): OG_06_0001533_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00007p00264610
Cluster HCCA: Cluster_16

Target Alias Description ECC score Gene Family Method Actions
AT2G24400 No alias SAUR-like auxin-responsive protein family 0.03 Archaeplastida
AT2G45210 No alias SAUR-like auxin-responsive protein family 0.04 Archaeplastida
AT3G20220 No alias SAUR-like auxin-responsive protein family 0.05 Archaeplastida
AT4G38840 No alias SAUR-like auxin-responsive protein family 0.02 Archaeplastida
AT5G18010 No alias SAUR-like auxin-responsive protein family 0.03 Archaeplastida
AT5G18050 No alias SAUR-like auxin-responsive protein family 0.03 Archaeplastida
AT5G50760 No alias SAUR-like auxin-responsive protein family 0.02 Archaeplastida
GSVIVT01015023001 No alias No description available 0.06 Archaeplastida
GSVIVT01019103001 No alias Auxin-responsive protein SAUR23 OS=Arabidopsis thaliana 0.05 Archaeplastida
Gb_02928 No alias Auxin-responsive protein SAUR50 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Gb_02943 No alias Auxin-responsive protein SAUR50 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Gb_18131 No alias no hits & (original description: none) 0.02 Archaeplastida
Gb_29893 No alias Indole-3-acetic acid-induced protein ARG7 OS=Vigna... 0.04 Archaeplastida
LOC_Os02g24740.1 No alias Auxin-responsive protein SAUR50 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os04g43740.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os06g48850.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os09g26610.1 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_10205229g0010 No alias Auxin-responsive protein SAUR50 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_10431311g0010 No alias Auxin-responsive protein SAUR50 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_10431652g0010 No alias Auxin-responsive protein SAUR50 OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_10434931g0020 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_16245g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_202640g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_68091g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_75867g0010 No alias Auxin-responsive protein SAUR50 OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_7654907g0010 No alias Auxin-responsive protein SAUR50 OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_80409g0010 No alias Auxin-responsive protein SAUR50 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Pp3c13_18960V3.1 No alias SAUR-like auxin-responsive protein family 0.02 Archaeplastida
Pp3c13_3260V3.1 No alias SAUR-like auxin-responsive protein family 0.02 Archaeplastida
Smo440501 No alias No description available 0.02 Archaeplastida
Smo90204 No alias No description available 0.04 Archaeplastida
Solyc01g096340.3.1 No alias Auxin-responsive protein SAUR32 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Solyc01g110610.4.1 No alias Auxin-responsive protein SAUR50 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Solyc01g110790.3.1 No alias Auxin-induced protein 15A OS=Glycine max... 0.02 Archaeplastida
Solyc04g052970.3.1 No alias Indole-3-acetic acid-induced protein ARG7 OS=Vigna... 0.02 Archaeplastida
Solyc04g053000.1.1 No alias Auxin-responsive protein SAUR21 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Solyc05g025920.3.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Solyc07g042470.3.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc11g011650.1.1 No alias Auxin-responsive protein SAUR22 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Zm00001e009872_P002 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e018791_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e030223_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e036561_P001 No alias Auxin-responsive protein SAUR50 OS=Helianthus annuus... 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000103 sulfate assimilation IEP Neighborhood
MF GO:0003779 actin binding IEP Neighborhood
MF GO:0004020 adenylylsulfate kinase activity IEP Neighborhood
CC GO:0005737 cytoplasm IEP Neighborhood
BP GO:0006020 inositol metabolic process IEP Neighborhood
BP GO:0006066 alcohol metabolic process IEP Neighborhood
BP GO:0007275 multicellular organism development IEP Neighborhood
MF GO:0008092 cytoskeletal protein binding IEP Neighborhood
BP GO:0008654 phospholipid biosynthetic process IEP Neighborhood
BP GO:0009056 catabolic process IEP Neighborhood
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Neighborhood
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Neighborhood
MF GO:0016780 phosphotransferase activity, for other substituted phosphate groups IEP Neighborhood
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Neighborhood
MF GO:0019205 nucleobase-containing compound kinase activity IEP Neighborhood
BP GO:0019310 inositol catabolic process IEP Neighborhood
BP GO:0019751 polyol metabolic process IEP Neighborhood
BP GO:0032501 multicellular organismal process IEP Neighborhood
BP GO:0032502 developmental process IEP Neighborhood
BP GO:0044248 cellular catabolic process IEP Neighborhood
BP GO:0044275 cellular carbohydrate catabolic process IEP Neighborhood
BP GO:0044282 small molecule catabolic process IEP Neighborhood
BP GO:0046164 alcohol catabolic process IEP Neighborhood
BP GO:0046174 polyol catabolic process IEP Neighborhood
BP GO:0048856 anatomical structure development IEP Neighborhood
MF GO:0050113 inositol oxygenase activity IEP Neighborhood
MF GO:0051287 NAD binding IEP Neighborhood
BP GO:1901575 organic substance catabolic process IEP Neighborhood
BP GO:1901615 organic hydroxy compound metabolic process IEP Neighborhood
BP GO:1901616 organic hydroxy compound catabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR003676 SAUR_fam 20 104
No external refs found!