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  5. LOC_Os07g03458.1

LOC_Os07g03458.1


Description : Basic form of pathogenesis-related protein 1 OS=Nicotiana tabacum (sp|p11670|prb1_tobac : 141.0)


Gene families : OG0000081 (Archaeplastida) Phylogenetic Tree(s): OG0000081_tree ,
OG_05_0000056 (LandPlants) Phylogenetic Tree(s): OG_05_0000056_tree ,
OG_06_0000073 (SeedPlants) Phylogenetic Tree(s): OG_06_0000073_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os07g03458.1
Cluster HCCA: Cluster_245

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00012p00263870 evm_27.TU.AmTr_v1... Pathogenesis-related protein PR-1 OS=Medicago truncatula 0.02 Archaeplastida
AMTR_s00012p00263950 evm_27.TU.AmTr_v1... Pathogenesis-related protein PR-1 OS=Medicago truncatula 0.03 Archaeplastida
AMTR_s00019p00199580 evm_27.TU.AmTr_v1... Pathogenesis-related protein PR-1 OS=Medicago truncatula 0.02 Archaeplastida
AMTR_s00019p00200490 evm_27.TU.AmTr_v1... Pathogenesis-related protein PR-1 OS=Medicago truncatula 0.03 Archaeplastida
AMTR_s00029p00197310 evm_27.TU.AmTr_v1... Basic form of pathogenesis-related protein 1 OS=Nicotiana tabacum 0.03 Archaeplastida
AMTR_s00059p00174680 evm_27.TU.AmTr_v1... STS14 protein OS=Solanum tuberosum 0.02 Archaeplastida
AT2G14580 PRB1, ATPRB1 basic pathogenesis-related protein 1 0.03 Archaeplastida
AT2G14610 ATPR1, PR1, PR 1 pathogenesis-related gene 1 0.02 Archaeplastida
AT2G19970 No alias CAP (Cysteine-rich secretory proteins, Antigen 5, and... 0.03 Archaeplastida
AT4G25790 No alias CAP (Cysteine-rich secretory proteins, Antigen 5, and... 0.05 Archaeplastida
AT4G30320 No alias CAP (Cysteine-rich secretory proteins, Antigen 5, and... 0.03 Archaeplastida
AT4G31470 No alias CAP (Cysteine-rich secretory proteins, Antigen 5, and... 0.03 Archaeplastida
AT4G33710 No alias CAP (Cysteine-rich secretory proteins, Antigen 5, and... 0.03 Archaeplastida
AT4G33720 No alias CAP (Cysteine-rich secretory proteins, Antigen 5, and... 0.06 Archaeplastida
AT4G33730 No alias CAP (Cysteine-rich secretory proteins, Antigen 5, and... 0.05 Archaeplastida
AT5G26130 No alias CAP (Cysteine-rich secretory proteins, Antigen 5, and... 0.04 Archaeplastida
AT5G57625 No alias CAP (Cysteine-rich secretory proteins, Antigen 5, and... 0.05 Archaeplastida
AT5G66590 No alias CAP (Cysteine-rich secretory proteins, Antigen 5, and... 0.02 Archaeplastida
GSVIVT01037014001 No alias Basic form of pathogenesis-related protein 1 OS=Nicotiana tabacum 0.03 Archaeplastida
GSVIVT01037015001 No alias Basic form of pathogenesis-related protein 1 OS=Nicotiana tabacum 0.04 Archaeplastida
Gb_07639 No alias STS14 protein OS=Solanum tuberosum (sp|q41495|st14_soltu : 159.0) 0.02 Archaeplastida
Gb_11042 No alias Pathogenesis-related protein PR-1 OS=Medicago truncatula... 0.02 Archaeplastida
Gb_11053 No alias Pathogenesis-related protein PR-1 OS=Medicago truncatula... 0.03 Archaeplastida
Gb_11054 No alias Pathogenesis-related protein PR-1 OS=Medicago truncatula... 0.03 Archaeplastida
Gb_13683 No alias Pathogenesis-related protein PR-1 OS=Medicago truncatula... 0.03 Archaeplastida
LOC_Os01g28500.1 No alias Pathogenesis-related protein PRMS OS=Zea mays... 0.06 Archaeplastida
LOC_Os02g54540.1 No alias Pathogenesis-related protein PR-1 OS=Medicago truncatula... 0.05 Archaeplastida
MA_102795g0010 No alias Pathogenesis-related protein PR-1 OS=Medicago truncatula... 0.05 Archaeplastida
MA_10428480g0010 No alias Basic form of pathogenesis-related protein 1... 0.02 Archaeplastida
MA_245441g0010 No alias Pathogenesis-related protein 1B OS=Nicotiana tabacum... 0.02 Archaeplastida
MA_30959g0010 No alias Pathogenesis-related protein PR-1 OS=Medicago truncatula... 0.02 Archaeplastida
MA_317009g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_53673g0010 No alias Pathogenesis-related protein 1B OS=Nicotiana tabacum... 0.03 Archaeplastida
Mp3g14110.1 No alias Pathogenesis-related protein 1 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Mp3g14130.1 No alias Pathogenesis-related protein 1 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Mp3g21890.1 No alias Pathogenesis-related protein 1C OS=Nicotiana tabacum... 0.03 Archaeplastida
Mp5g16820.1 No alias Basic form of pathogenesis-related protein 1... 0.04 Archaeplastida
Mp7g13960.1 No alias Pathogenesis-related protein PRMS OS=Zea mays... 0.04 Archaeplastida
Pp3c5_3350V3.1 No alias CAP (Cysteine-rich secretory proteins, Antigen 5, and... 0.02 Archaeplastida
Smo100429 No alias Pathogenesis-related protein PR-1 OS=Medicago truncatula 0.03 Archaeplastida
Smo233855 No alias Pathogenesis-related protein PR-1 OS=Medicago truncatula 0.02 Archaeplastida
Smo76987 No alias Pathogenesis-related protein PR-1 type OS=Sambucus nigra 0.03 Archaeplastida
Zm00001e002028_P001 No alias Pathogenesis-related protein PRMS OS=Zea mays... 0.06 Archaeplastida
Zm00001e011196_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e016073_P001 No alias Pathogenesis-related protein PR-1 OS=Medicago truncatula... 0.04 Archaeplastida
Zm00001e023732_P001 No alias Pathogenesis-related protein 1 OS=Hordeum vulgare... 0.08 Archaeplastida
Zm00001e032757_P001 No alias Pathogenesis-related protein PRMS OS=Zea mays... 0.03 Archaeplastida
Zm00001e033272_P001 No alias Pathogenesis-related protein PRMS OS=Zea mays... 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Neighborhood
BP GO:0006629 lipid metabolic process IEP Neighborhood
BP GO:0009116 nucleoside metabolic process IEP Neighborhood
BP GO:0009605 response to external stimulus IEP Neighborhood
BP GO:0009606 tropism IEP Neighborhood
BP GO:0010274 hydrotropism IEP Neighborhood
CC GO:0016021 integral component of membrane IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
MF GO:0030246 carbohydrate binding IEP Neighborhood
CC GO:0031224 intrinsic component of membrane IEP Neighborhood
MF GO:0045735 nutrient reservoir activity IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
BP GO:0050896 response to stimulus IEP Neighborhood
BP GO:1901657 glycosyl compound metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR014044 CAP_domain 36 159
No external refs found!