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  5. LOC_Os07g03680.1

LOC_Os07g03680.1


Description : Pathogenesis-related protein 1B OS=Nicotiana tabacum (sp|p07053|pr1b_tobac : 118.0)


Gene families : OG0000081 (Archaeplastida) Phylogenetic Tree(s): OG0000081_tree ,
OG_05_0000056 (LandPlants) Phylogenetic Tree(s): OG_05_0000056_tree ,
OG_06_0000073 (SeedPlants) Phylogenetic Tree(s): OG_06_0000073_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os07g03680.1
Cluster HCCA: Cluster_159

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00012p00263870 evm_27.TU.AmTr_v1... Pathogenesis-related protein PR-1 OS=Medicago truncatula 0.02 Archaeplastida
AMTR_s00029p00197310 evm_27.TU.AmTr_v1... Basic form of pathogenesis-related protein 1 OS=Nicotiana tabacum 0.03 Archaeplastida
AMTR_s00029p00197600 evm_27.TU.AmTr_v1... Pathogenesis-related protein 1C OS=Nicotiana tabacum 0.02 Archaeplastida
AT4G30320 No alias CAP (Cysteine-rich secretory proteins, Antigen 5, and... 0.03 Archaeplastida
AT4G33710 No alias CAP (Cysteine-rich secretory proteins, Antigen 5, and... 0.05 Archaeplastida
AT4G33720 No alias CAP (Cysteine-rich secretory proteins, Antigen 5, and... 0.03 Archaeplastida
GSVIVT01037005001 No alias Basic form of pathogenesis-related protein 1 OS=Nicotiana tabacum 0.02 Archaeplastida
GSVIVT01037011001 No alias Basic form of pathogenesis-related protein 1 OS=Nicotiana tabacum 0.04 Archaeplastida
LOC_Os01g28500.1 No alias Pathogenesis-related protein PRMS OS=Zea mays... 0.04 Archaeplastida
LOC_Os07g03580.1 No alias Pathogenesis-related protein PRB1-2 OS=Hordeum vulgare... 0.04 Archaeplastida
LOC_Os07g03710.1 No alias Pathogenesis-related protein PRMS OS=Zea mays... 0.03 Archaeplastida
LOC_Os10g11500.1 No alias Pathogenesis-related protein PRMS OS=Zea mays... 0.03 Archaeplastida
MA_245441g0010 No alias Pathogenesis-related protein 1B OS=Nicotiana tabacum... 0.02 Archaeplastida
MA_30959g0010 No alias Pathogenesis-related protein PR-1 OS=Medicago truncatula... 0.02 Archaeplastida
MA_317009g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_501572g0010 No alias Basic form of pathogenesis-related protein 1... 0.03 Archaeplastida
MA_53673g0010 No alias Pathogenesis-related protein 1B OS=Nicotiana tabacum... 0.03 Archaeplastida
MA_907632g0010 No alias Pathogenesis-related protein PR-1 OS=Medicago truncatula... 0.02 Archaeplastida
Mp1g08990.1 No alias Pathogenesis-related protein PRB1-2 OS=Hordeum vulgare... 0.03 Archaeplastida
Mp5g16820.1 No alias Basic form of pathogenesis-related protein 1... 0.03 Archaeplastida
Mp7g00440.1 No alias Pathogenesis-related protein PR-1 OS=Medicago truncatula... 0.02 Archaeplastida
Mp7g13960.1 No alias Pathogenesis-related protein PRMS OS=Zea mays... 0.02 Archaeplastida
Smo112379 No alias Pathogenesis-related protein 1C OS=Nicotiana tabacum 0.02 Archaeplastida
Smo230161 No alias Pathogenesis-related protein 1C OS=Nicotiana tabacum 0.02 Archaeplastida
Smo76987 No alias Pathogenesis-related protein PR-1 type OS=Sambucus nigra 0.03 Archaeplastida
Solyc02g065470.1.1 No alias STS14 protein OS=Solanum tuberosum (sp|q41495|st14_soltu : 284.0) 0.03 Archaeplastida
Zm00001e016075_P001 No alias Pathogenesis-related protein 1 OS=Hordeum vulgare... 0.02 Archaeplastida
Zm00001e032756_P001 No alias Pathogenesis-related protein 1 OS=Hordeum vulgare... 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003993 acid phosphatase activity IEP Neighborhood
BP GO:0006417 regulation of translation IEP Neighborhood
BP GO:0009890 negative regulation of biosynthetic process IEP Neighborhood
BP GO:0009892 negative regulation of metabolic process IEP Neighborhood
BP GO:0010558 negative regulation of macromolecule biosynthetic process IEP Neighborhood
BP GO:0010605 negative regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0010608 posttranscriptional regulation of gene expression IEP Neighborhood
BP GO:0010629 negative regulation of gene expression IEP Neighborhood
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP Neighborhood
BP GO:0017148 negative regulation of translation IEP Neighborhood
MF GO:0030597 RNA glycosylase activity IEP Neighborhood
MF GO:0030598 rRNA N-glycosylase activity IEP Neighborhood
BP GO:0031324 negative regulation of cellular metabolic process IEP Neighborhood
BP GO:0031327 negative regulation of cellular biosynthetic process IEP Neighborhood
BP GO:0032269 negative regulation of cellular protein metabolic process IEP Neighborhood
BP GO:0034248 regulation of cellular amide metabolic process IEP Neighborhood
BP GO:0034249 negative regulation of cellular amide metabolic process IEP Neighborhood
BP GO:0048523 negative regulation of cellular process IEP Neighborhood
BP GO:0051172 negative regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051248 negative regulation of protein metabolic process IEP Neighborhood
MF GO:0140102 catalytic activity, acting on a rRNA IEP Neighborhood
BP GO:2000113 negative regulation of cellular macromolecule biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR014044 CAP_domain 39 170
No external refs found!