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  5. LOC_Os07g08320.1

LOC_Os07g08320.1


Description : Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis thaliana (sp|q9asp6|hnrpq_arath : 146.0)


Gene families : OG0000959 (Archaeplastida) Phylogenetic Tree(s): OG0000959_tree ,
OG_05_0000587 (LandPlants) Phylogenetic Tree(s): OG_05_0000587_tree ,
OG_06_0012773 (SeedPlants) Phylogenetic Tree(s): OG_06_0012773_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os07g08320.1
Cluster HCCA: Cluster_192

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00027p00223150 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
Zm00001e007365_P001 No alias Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis... 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000808 origin recognition complex IEP Neighborhood
MF GO:0003896 DNA primase activity IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
MF GO:0005534 galactose binding IEP Neighborhood
CC GO:0005664 nuclear origin of replication recognition complex IEP Neighborhood
BP GO:0005991 trehalose metabolic process IEP Neighborhood
BP GO:0005992 trehalose biosynthetic process IEP Neighborhood
BP GO:0006269 DNA replication, synthesis of RNA primer IEP Neighborhood
BP GO:0006553 lysine metabolic process IEP Neighborhood
MF GO:0008536 Ran GTPase binding IEP Neighborhood
MF GO:0008839 4-hydroxy-tetrahydrodipicolinate reductase IEP Neighborhood
BP GO:0009066 aspartate family amino acid metabolic process IEP Neighborhood
BP GO:0009067 aspartate family amino acid biosynthetic process IEP Neighborhood
BP GO:0009085 lysine biosynthetic process IEP Neighborhood
BP GO:0009089 lysine biosynthetic process via diaminopimelate IEP Neighborhood
MF GO:0016628 oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor IEP Neighborhood
MF GO:0017016 Ras GTPase binding IEP Neighborhood
MF GO:0031267 small GTPase binding IEP Neighborhood
BP GO:0043648 dicarboxylic acid metabolic process IEP Neighborhood
CC GO:0044454 nuclear chromosome part IEP Neighborhood
BP GO:0046451 diaminopimelate metabolic process IEP Neighborhood
MF GO:0048029 monosaccharide binding IEP Neighborhood
MF GO:0051020 GTPase binding IEP Neighborhood
InterPro domains Description Start Stop
IPR000504 RRM_dom 413 479
IPR000504 RRM_dom 318 387
IPR000504 RRM_dom 238 305
No external refs found!