AMTR_s00008p00021210 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00008.7

Description : Solute transport.primary active transport.ABC superfamily.ABC2 family.subfamily ABCG transporter


Gene families : OG0000249 (Archaeplastida) Phylogenetic Tree(s): OG0000249_tree ,
OG_05_0000734 (LandPlants) Phylogenetic Tree(s): OG_05_0000734_tree ,
OG_06_0000499 (SeedPlants) Phylogenetic Tree(s): OG_06_0000499_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00008p00021210
Cluster HCCA: Cluster_6

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00171p00031180 evm_27.TU.AmTr_v1... Solute transport.primary active transport.ABC... 0.04 Archaeplastida
AT1G51460 No alias ABC-2 type transporter family protein 0.04 Archaeplastida
LOC_Os10g35180.1 No alias suberin/cutin lipid exporter (DSO). subfamily ABCG transporter 0.03 Archaeplastida
MA_69480g0010 No alias suberin/cutin lipid exporter (DSO). wax lipid exporter... 0.02 Archaeplastida
MA_7934311g0010 No alias ABC transporter G family member 11 OS=Arabidopsis... 0.02 Archaeplastida
Mp2g16700.1 No alias suberin/cutin lipid exporter (DSO). subfamily ABCG transporter 0.02 Archaeplastida
Mp2g16720.1 No alias subfamily ABCG transporter 0.02 Archaeplastida
Pp3c6_10410V3.1 No alias white-brown complex homolog protein 11 0.02 Archaeplastida
Smo167920 No alias Solute transport.primary active transport.ABC... 0.04 Archaeplastida
Smo171321 No alias Solute transport.primary active transport.ABC... 0.02 Archaeplastida
Smo234186 No alias Solute transport.primary active transport.ABC... 0.03 Archaeplastida
Solyc11g065350.2.1 No alias wax lipid exporter (CER5). subfamily ABCG transporter 0.07 Archaeplastida
Zm00001e033298_P002 No alias subfamily ABCG transporter 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
MF GO:0016887 ATPase activity IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0005506 iron ion binding IEP Neighborhood
BP GO:0006629 lipid metabolic process IEP Neighborhood
MF GO:0009055 electron transfer activity IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like 148 275
IPR013525 ABC_2_trans 424 636
No external refs found!