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  5. LOC_Os07g09470.1

LOC_Os07g09470.1


Description : AAA-ATPase At3g28610 OS=Arabidopsis thaliana (sp|q9ljj5|aatpb_arath : 398.0)


Gene families : OG0000095 (Archaeplastida) Phylogenetic Tree(s): OG0000095_tree ,
OG_05_0000059 (LandPlants) Phylogenetic Tree(s): OG_05_0000059_tree ,
OG_06_0013069 (SeedPlants) Phylogenetic Tree(s): OG_06_0013069_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os07g09470.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00014p00241930 evm_27.TU.AmTr_v1... Protein HYPER-SENSITIVITY-RELATED 4 OS=Arabidopsis thaliana 0.03 Archaeplastida
AMTR_s00019p00215810 evm_27.TU.AmTr_v1... AAA-ATPase At5g57480 OS=Arabidopsis thaliana 0.03 Archaeplastida
AMTR_s00019p00244450 evm_27.TU.AmTr_v1... AAA-ATPase At3g28510 OS=Arabidopsis thaliana 0.03 Archaeplastida
AMTR_s00019p00244830 evm_27.TU.AmTr_v1... AAA-ATPase At3g50940 OS=Arabidopsis thaliana 0.01 Archaeplastida
AT3G28510 No alias P-loop containing nucleoside triphosphate hydrolases... 0.02 Archaeplastida
AT3G28520 No alias P-loop containing nucleoside triphosphate hydrolases... 0.01 Archaeplastida
AT3G28540 No alias P-loop containing nucleoside triphosphate hydrolases... 0.02 Archaeplastida
AT3G50930 BCS1 cytochrome BC1 synthesis 0.01 Archaeplastida
AT4G25835 No alias P-loop containing nucleoside triphosphate hydrolases... 0.03 Archaeplastida
AT5G17730 No alias P-loop containing nucleoside triphosphate hydrolases... 0.02 Archaeplastida
AT5G40010 AATP1 AAA-ATPase 1 0.02 Archaeplastida
GSVIVT01008088001 No alias AAA-ATPase At3g28540 OS=Arabidopsis thaliana 0.02 Archaeplastida
GSVIVT01010371001 No alias AAA-ATPase At5g17760 OS=Arabidopsis thaliana 0.02 Archaeplastida
GSVIVT01023336001 No alias AAA-ATPase At3g28600 OS=Arabidopsis thaliana 0.01 Archaeplastida
Gb_27547 No alias AAA-ATPase At3g28580 OS=Arabidopsis thaliana... 0.1 Archaeplastida
Gb_34238 No alias AAA-ATPase At5g57480 OS=Arabidopsis thaliana... 0.04 Archaeplastida
LOC_Os03g02330.1 No alias AAA-ATPase At2g46620 OS=Arabidopsis thaliana... 0.01 Archaeplastida
LOC_Os03g58800.1 No alias AAA-ATPase At3g28580 OS=Arabidopsis thaliana... 0.01 Archaeplastida
LOC_Os07g09420.1 No alias AAA-ATPase At3g28580 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os12g28590.1 No alias AAA-ATPase At3g28580 OS=Arabidopsis thaliana... 0.01 Archaeplastida
LOC_Os12g44190.1 No alias AAA-ATPase ASD, mitochondrial OS=Arabidopsis thaliana... 0.01 Archaeplastida
LOC_Os12g44210.1 No alias AAA-ATPase ASD, mitochondrial OS=Arabidopsis thaliana... 0.05 Archaeplastida
MA_10067279g0010 No alias AAA-ATPase At5g57480 OS=Arabidopsis thaliana... 0.01 Archaeplastida
MA_10430798g0020 No alias AAA-ATPase At3g28510 OS=Arabidopsis thaliana... 0.05 Archaeplastida
MA_10436428g0010 No alias AAA-ATPase At3g28610 OS=Arabidopsis thaliana... 0.09 Archaeplastida
MA_161279g0020 No alias AAA-ATPase At3g28610 OS=Arabidopsis thaliana... 0.09 Archaeplastida
MA_344969g0010 No alias AAA-ATPase At4g25835 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_56516g0010 No alias AAA-ATPase At3g28570, mitochondrial OS=Arabidopsis... 0.01 Archaeplastida
MA_604139g0010 No alias AAA-ATPase At3g28510 OS=Arabidopsis thaliana... 0.04 Archaeplastida
MA_69227g0010 No alias AAA-ATPase At5g57480 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Pp3c12_21960V3.1 No alias P-loop containing nucleoside triphosphate hydrolases... 0.05 Archaeplastida
Pp3c8_710V3.1 No alias P-loop containing nucleoside triphosphate hydrolases... 0.1 Archaeplastida
Smo419965 No alias AAA-ATPase At4g30250 OS=Arabidopsis thaliana 0.04 Archaeplastida
Solyc03g033790.4.1 No alias Protein HYPER-SENSITIVITY-RELATED 4 OS=Arabidopsis... 0.03 Archaeplastida
Solyc03g082640.3.1 No alias AAA-ATPase At2g46620 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Zm00001e004348_P001 No alias AAA-ATPase At2g46620 OS=Arabidopsis thaliana... 0.01 Archaeplastida
Zm00001e020637_P001 No alias Protein HYPER-SENSITIVITY-RELATED 4 OS=Arabidopsis... 0.08 Archaeplastida
Zm00001e027961_P001 No alias AAA-ATPase At3g50940 OS=Arabidopsis thaliana... 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0005506 iron ion binding IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0016746 transferase activity, transferring acyl groups IEP Neighborhood
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
InterPro domains Description Start Stop
IPR025753 AAA_N_dom 52 153
IPR003959 ATPase_AAA_core 277 414
No external refs found!