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  5. LOC_Os07g11440.1

LOC_Os07g11440.1


Description : chalcone synthase


Gene families : OG0000336 (Archaeplastida) Phylogenetic Tree(s): OG0000336_tree ,
OG_05_0000154 (LandPlants) Phylogenetic Tree(s): OG_05_0000154_tree ,
OG_06_0000206 (SeedPlants) Phylogenetic Tree(s): OG_06_0000206_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os07g11440.1
Cluster HCCA: Cluster_216

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00102p00092780 evm_27.TU.AmTr_v1... Secondary metabolism.phenolics.flavonoid synthesis and... 0.02 Archaeplastida
GSVIVT01010554001 No alias Secondary metabolism.phenolics.flavonoid synthesis and... 0.03 Archaeplastida
GSVIVT01010556001 No alias Stilbene synthase 6 OS=Vitis vinifera 0.06 Archaeplastida
GSVIVT01010561001 No alias Stilbene synthase 1 OS=Vitis vinifera 0.03 Archaeplastida
GSVIVT01010563001 No alias Secondary metabolism.phenolics.flavonoid synthesis and... 0.04 Archaeplastida
GSVIVT01010565001 No alias Secondary metabolism.phenolics.flavonoid synthesis and... 0.03 Archaeplastida
GSVIVT01010572001 No alias Secondary metabolism.phenolics.flavonoid synthesis and... 0.04 Archaeplastida
GSVIVT01010574001 No alias Secondary metabolism.phenolics.flavonoid synthesis and... 0.03 Archaeplastida
GSVIVT01010580001 No alias Secondary metabolism.phenolics.flavonoid synthesis and... 0.03 Archaeplastida
GSVIVT01010581001 No alias Secondary metabolism.phenolics.flavonoid synthesis and... 0.03 Archaeplastida
GSVIVT01010582001 No alias Secondary metabolism.phenolics.flavonoid synthesis and... 0.03 Archaeplastida
GSVIVT01010585001 No alias Secondary metabolism.phenolics.flavonoid synthesis and... 0.03 Archaeplastida
GSVIVT01010589001 No alias Secondary metabolism.phenolics.flavonoid synthesis and... 0.04 Archaeplastida
GSVIVT01010590001 No alias Secondary metabolism.phenolics.flavonoid synthesis and... 0.05 Archaeplastida
Gb_32469 No alias chalcone synthase 0.02 Archaeplastida
Mp4g14180.1 No alias chalcone synthase 0.02 Archaeplastida
Mp4g14190.1 No alias chalcone synthase 0.03 Archaeplastida
Mp7g14890.1 No alias chalcone synthase 0.02 Archaeplastida
Mp7g14960.1 No alias chalcone synthase 0.02 Archaeplastida
Zm00001e014215_P001 No alias Chalcone synthase 3 OS=Bromheadia finlaysoniana... 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006629 lipid metabolic process IEP Neighborhood
MF GO:0010309 acireductone dioxygenase [iron(II)-requiring] activity IEP Neighborhood
MF GO:0010333 terpene synthase activity IEP Neighborhood
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Neighborhood
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP Neighborhood
MF GO:0051213 dioxygenase activity IEP Neighborhood
InterPro domains Description Start Stop
IPR012328 Chalcone/stilbene_synth_C 243 393
IPR001099 Chalcone/stilbene_synthase_N 9 232
No external refs found!