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  5. LOC_Os07g12170.1

LOC_Os07g12170.1


Description : ARF-GTPase


Gene families : OG0000310 (Archaeplastida) Phylogenetic Tree(s): OG0000310_tree ,
OG_05_0000213 (LandPlants) Phylogenetic Tree(s): OG_05_0000213_tree ,
OG_06_0000536 (SeedPlants) Phylogenetic Tree(s): OG_06_0000536_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os07g12170.1
Cluster HCCA: Cluster_209

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00096p00110370 No alias Vesicle trafficking.Coat protein I (COPI) coatomer... 0.03 Archaeplastida
AT1G10630 ATARFA1F, ARFA1F ADP-ribosylation factor A1F 0.04 Archaeplastida
AT2G24765 ATARL1, ARF3, ARL1 ADP-ribosylation factor 3 0.02 Archaeplastida
AT3G62290 ARFA1E, ATARFA1E ADP-ribosylation factor A1E 0.02 Archaeplastida
AT5G14670 ATARFA1B, ARFA1B ADP-ribosylation factor A1B 0.02 Archaeplastida
AT5G17060 ATARFB1B, ARFB1B ADP-ribosylation factor B1B 0.03 Archaeplastida
Cpa|evm.model.tig00001093.2 No alias Vesicle trafficking.Coat protein I (COPI) coatomer... 0.01 Archaeplastida
Cpa|evm.model.tig00021127.129 No alias Vesicle trafficking.Coat protein I (COPI) coatomer... 0.02 Archaeplastida
Cre12.g535900 No alias Vesicle trafficking.Coat protein I (COPI) coatomer... 0.06 Archaeplastida
GSVIVT01013765001 No alias Vesicle trafficking.Coat protein I (COPI) coatomer... 0.07 Archaeplastida
Gb_00987 No alias ARF-GTPase 0.02 Archaeplastida
MA_167779g0010 No alias ADP-ribosylation factor 3 OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_92857g0020 No alias no hits & (original description: none) 0.03 Archaeplastida
Mp2g14560.1 No alias ARF-GTPase 0.03 Archaeplastida
Mp3g13920.1 No alias ARF-GTPase 0.02 Archaeplastida
Mp8g06130.1 No alias ARF-GTPase 0.05 Archaeplastida
Pp3c10_20740V3.1 No alias ADP-ribosylation factor A1E 0.02 Archaeplastida
Pp3c12_14910V3.1 No alias ADP-ribosylation factor A1E 0.03 Archaeplastida
Pp3c12_14940V3.1 No alias ADP-ribosylation factor A1E 0.03 Archaeplastida
Smo75668 No alias Vesicle trafficking.Coat protein I (COPI) coatomer... 0.02 Archaeplastida
Solyc01g100860.3.1 No alias ARF-GTPase 0.03 Archaeplastida
Solyc07g006640.3.1 No alias ARF-GTPase 0.04 Archaeplastida
Zm00001e021566_P001 No alias ARF-GTPase 0.02 Archaeplastida
Zm00001e033127_P003 No alias ARF-GTPase 0.05 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP Neighborhood
MF GO:0003872 6-phosphofructokinase activity IEP Neighborhood
MF GO:0003924 GTPase activity IEP Neighborhood
MF GO:0005096 GTPase activator activity IEP Neighborhood
BP GO:0006090 pyruvate metabolic process IEP Neighborhood
BP GO:0006091 generation of precursor metabolites and energy IEP Neighborhood
BP GO:0006096 glycolytic process IEP Neighborhood
BP GO:0006165 nucleoside diphosphate phosphorylation IEP Neighborhood
BP GO:0006733 oxidoreduction coenzyme metabolic process IEP Neighborhood
BP GO:0006757 ATP generation from ADP IEP Neighborhood
BP GO:0006810 transport IEP Neighborhood
BP GO:0006887 exocytosis IEP Neighborhood
BP GO:0006888 ER to Golgi vesicle-mediated transport IEP Neighborhood
MF GO:0008047 enzyme activator activity IEP Neighborhood
MF GO:0008113 peptide-methionine (S)-S-oxide reductase activity IEP Neighborhood
MF GO:0008121 ubiquinol-cytochrome-c reductase activity IEP Neighborhood
MF GO:0008443 phosphofructokinase activity IEP Neighborhood
BP GO:0009108 coenzyme biosynthetic process IEP Neighborhood
BP GO:0009132 nucleoside diphosphate metabolic process IEP Neighborhood
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP Neighborhood
BP GO:0009166 nucleotide catabolic process IEP Neighborhood
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP Neighborhood
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP Neighborhood
MF GO:0015095 magnesium ion transmembrane transporter activity IEP Neighborhood
BP GO:0015693 magnesium ion transport IEP Neighborhood
BP GO:0016052 carbohydrate catabolic process IEP Neighborhood
BP GO:0016192 vesicle-mediated transport IEP Neighborhood
MF GO:0016462 pyrophosphatase activity IEP Neighborhood
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Neighborhood
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP Neighborhood
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP Neighborhood
MF GO:0016681 oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor IEP Neighborhood
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Neighborhood
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Neighborhood
MF GO:0017111 nucleoside-triphosphatase activity IEP Neighborhood
MF GO:0019200 carbohydrate kinase activity IEP Neighborhood
BP GO:0019359 nicotinamide nucleotide biosynthetic process IEP Neighborhood
BP GO:0019362 pyridine nucleotide metabolic process IEP Neighborhood
BP GO:0019363 pyridine nucleotide biosynthetic process IEP Neighborhood
BP GO:0019439 aromatic compound catabolic process IEP Neighborhood
CC GO:0030117 membrane coat IEP Neighborhood
CC GO:0030120 vesicle coat IEP Neighborhood
CC GO:0030127 COPII vesicle coat IEP Neighborhood
MF GO:0030695 GTPase regulator activity IEP Neighborhood
BP GO:0032940 secretion by cell IEP Neighborhood
BP GO:0034404 nucleobase-containing small molecule biosynthetic process IEP Neighborhood
BP GO:0034655 nucleobase-containing compound catabolic process IEP Neighborhood
BP GO:0042866 pyruvate biosynthetic process IEP Neighborhood
BP GO:0044270 cellular nitrogen compound catabolic process IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
CC GO:0044433 cytoplasmic vesicle part IEP Neighborhood
CC GO:0044448 cell cortex part IEP Neighborhood
BP GO:0046031 ADP metabolic process IEP Neighborhood
BP GO:0046434 organophosphate catabolic process IEP Neighborhood
BP GO:0046496 nicotinamide nucleotide metabolic process IEP Neighborhood
BP GO:0046700 heterocycle catabolic process IEP Neighborhood
BP GO:0046903 secretion IEP Neighborhood
BP GO:0046939 nucleotide phosphorylation IEP Neighborhood
BP GO:0048193 Golgi vesicle transport IEP Neighborhood
BP GO:0051179 localization IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood
MF GO:0051536 iron-sulfur cluster binding IEP Neighborhood
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP Neighborhood
MF GO:0051540 metal cluster binding IEP Neighborhood
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Neighborhood
BP GO:0070838 divalent metal ion transport IEP Neighborhood
BP GO:0072511 divalent inorganic cation transport IEP Neighborhood
BP GO:0072524 pyridine-containing compound metabolic process IEP Neighborhood
BP GO:0072525 pyridine-containing compound biosynthetic process IEP Neighborhood
CC GO:0099023 tethering complex IEP Neighborhood
BP GO:1901292 nucleoside phosphate catabolic process IEP Neighborhood
BP GO:1901361 organic cyclic compound catabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR006689 Small_GTPase_ARF/SAR 130 300
No external refs found!