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  5. AMTR_s00008p00083860

AMTR_s00008p00083860 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00008.28

Description : Cell wall.cellulose.synthesis.cellulose microfibrils and hemicellulose interaction.COB-type protein


Gene families : OG0000661 (Archaeplastida) Phylogenetic Tree(s): OG0000661_tree ,
OG_05_0000695 (LandPlants) Phylogenetic Tree(s): OG_05_0000695_tree ,
OG_06_0036099 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00008p00083860
Cluster HCCA: Cluster_165

Target Alias Description ECC score Gene Family Method Actions
AT1G09790 COBL6 COBRA-like protein 6 precursor 0.03 Archaeplastida
AT5G60920 COB COBRA-like extracellular glycosyl-phosphatidyl... 0.05 Archaeplastida
AT5G60950 COBL5 COBRA-like protein 5 precursor 0.03 Archaeplastida
GSVIVT01008128001 No alias Cell wall.cellulose.synthesis.cellulose microfibrils and... 0.05 Archaeplastida
GSVIVT01008129001 No alias Cell wall.cellulose.synthesis.cellulose microfibrils and... 0.03 Archaeplastida
GSVIVT01036565001 No alias Cell wall.cellulose.synthesis.cellulose microfibrils and... 0.03 Archaeplastida
GSVIVT01036566001 No alias Cell wall.cellulose.synthesis.cellulose microfibrils and... 0.07 Archaeplastida
Gb_17724 No alias COB cellulose microfibrils and hemicellulose interaction protein 0.02 Archaeplastida
Gb_25603 No alias COB cellulose microfibrils and hemicellulose interaction protein 0.04 Archaeplastida
Gb_36720 No alias COB cellulose microfibrils and hemicellulose interaction protein 0.04 Archaeplastida
LOC_Os03g30250.1 No alias COB cellulose microfibrils and hemicellulose interaction protein 0.03 Archaeplastida
LOC_Os03g54750.1 No alias COB cellulose microfibrils and hemicellulose interaction protein 0.03 Archaeplastida
LOC_Os04g45700.1 No alias COB cellulose microfibrils and hemicellulose interaction protein 0.02 Archaeplastida
LOC_Os05g32110.1 No alias COB cellulose microfibrils and hemicellulose interaction protein 0.04 Archaeplastida
LOC_Os07g41320.1 No alias COB cellulose microfibrils and hemicellulose interaction protein 0.03 Archaeplastida
MA_10431440g0010 No alias COB cellulose microfibrils and hemicellulose interaction protein 0.04 Archaeplastida
MA_124486g0010 No alias COB cellulose microfibrils and hemicellulose interaction protein 0.02 Archaeplastida
Mp7g06600.1 No alias COB cellulose microfibrils and hemicellulose interaction protein 0.04 Archaeplastida
Pp3c12_4550V3.1 No alias COBRA-like protein 1 precursor 0.03 Archaeplastida
Pp3c20_16270V3.1 No alias COBRA-like extracellular glycosyl-phosphatidyl... 0.04 Archaeplastida
Pp3c2_9820V3.1 No alias COBRA-like protein 1 precursor 0.05 Archaeplastida
Smo271954 No alias Cell wall.cellulose.synthesis.cellulose microfibrils and... 0.03 Archaeplastida
Solyc01g103860.4.1 No alias COB cellulose microfibrils and hemicellulose interaction protein 0.03 Archaeplastida
Solyc01g103877.1.1 No alias COB cellulose microfibrils and hemicellulose interaction protein 0.03 Archaeplastida
Solyc02g065765.1.1 No alias COB cellulose microfibrils and hemicellulose interaction protein 0.04 Archaeplastida
Solyc02g089130.4.1 No alias COB cellulose microfibrils and hemicellulose interaction protein 0.03 Archaeplastida
Solyc03g070440.4.1 No alias COB cellulose microfibrils and hemicellulose interaction protein 0.04 Archaeplastida
Solyc03g114890.4.1 No alias COB cellulose microfibrils and hemicellulose interaction protein 0.03 Archaeplastida
Solyc03g114900.3.1 No alias COB cellulose microfibrils and hemicellulose interaction protein 0.03 Archaeplastida
Zm00001e005710_P002 No alias No annotation 0.03 Archaeplastida
Zm00001e012022_P001 No alias COB cellulose microfibrils and hemicellulose interaction protein 0.02 Archaeplastida
Zm00001e035504_P002 No alias COB cellulose microfibrils and hemicellulose interaction protein 0.01 Archaeplastida
Zm00001e035505_P001 No alias COB cellulose microfibrils and hemicellulose interaction protein 0.02 Archaeplastida
Zm00001e038043_P001 No alias COB cellulose microfibrils and hemicellulose interaction protein 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP Neighborhood
BP GO:0000271 polysaccharide biosynthetic process IEP Neighborhood
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004601 peroxidase activity IEP Neighborhood
MF GO:0004672 protein kinase activity IEP Neighborhood
MF GO:0004857 enzyme inhibitor activity IEP Neighborhood
MF GO:0005215 transporter activity IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
CC GO:0005618 cell wall IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
BP GO:0005976 polysaccharide metabolic process IEP Neighborhood
BP GO:0005984 disaccharide metabolic process IEP Neighborhood
BP GO:0005991 trehalose metabolic process IEP Neighborhood
BP GO:0005992 trehalose biosynthetic process IEP Neighborhood
BP GO:0006066 alcohol metabolic process IEP Neighborhood
BP GO:0006071 glycerol metabolic process IEP Neighborhood
BP GO:0006073 cellular glucan metabolic process IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006793 phosphorus metabolic process IEP Neighborhood
BP GO:0006796 phosphate-containing compound metabolic process IEP Neighborhood
BP GO:0006807 nitrogen compound metabolic process IEP Neighborhood
BP GO:0006810 transport IEP Neighborhood
BP GO:0006811 ion transport IEP Neighborhood
BP GO:0006812 cation transport IEP Neighborhood
BP GO:0006887 exocytosis IEP Neighborhood
MF GO:0008081 phosphoric diester hydrolase activity IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
MF GO:0008194 UDP-glycosyltransferase activity IEP Neighborhood
MF GO:0008324 cation transmembrane transporter activity IEP Neighborhood
MF GO:0008889 glycerophosphodiester phosphodiesterase activity IEP Neighborhood
BP GO:0009250 glucan biosynthetic process IEP Neighborhood
BP GO:0009312 oligosaccharide biosynthetic process IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
MF GO:0015075 ion transmembrane transporter activity IEP Neighborhood
MF GO:0015077 monovalent inorganic cation transmembrane transporter activity IEP Neighborhood
MF GO:0015078 proton transmembrane transporter activity IEP Neighborhood
MF GO:0015095 magnesium ion transmembrane transporter activity IEP Neighborhood
MF GO:0015291 secondary active transmembrane transporter activity IEP Neighborhood
MF GO:0015297 antiporter activity IEP Neighborhood
MF GO:0015298 solute:cation antiporter activity IEP Neighborhood
MF GO:0015299 solute:proton antiporter activity IEP Neighborhood
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Neighborhood
BP GO:0015693 magnesium ion transport IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
CC GO:0016021 integral component of membrane IEP Neighborhood
BP GO:0016043 cellular component organization IEP Neighborhood
BP GO:0016051 carbohydrate biosynthetic process IEP Neighborhood
MF GO:0016209 antioxidant activity IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Neighborhood
MF GO:0016759 cellulose synthase activity IEP Neighborhood
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
BP GO:0019400 alditol metabolic process IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
BP GO:0019751 polyol metabolic process IEP Neighborhood
MF GO:0022804 active transmembrane transporter activity IEP Neighborhood
MF GO:0022857 transmembrane transporter activity IEP Neighborhood
MF GO:0022890 inorganic cation transmembrane transporter activity IEP Neighborhood
BP GO:0030001 metal ion transport IEP Neighborhood
MF GO:0030234 enzyme regulator activity IEP Neighborhood
BP GO:0030243 cellulose metabolic process IEP Neighborhood
BP GO:0030244 cellulose biosynthetic process IEP Neighborhood
MF GO:0030246 carbohydrate binding IEP Neighborhood
CC GO:0030312 external encapsulating structure IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
MF GO:0030599 pectinesterase activity IEP Neighborhood
CC GO:0031224 intrinsic component of membrane IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
BP GO:0032940 secretion by cell IEP Neighborhood
BP GO:0033692 cellular polysaccharide biosynthetic process IEP Neighborhood
BP GO:0034637 cellular carbohydrate biosynthetic process IEP Neighborhood
MF GO:0035251 UDP-glucosyltransferase activity IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
BP GO:0042545 cell wall modification IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
BP GO:0044042 glucan metabolic process IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0044262 cellular carbohydrate metabolic process IEP Neighborhood
BP GO:0044264 cellular polysaccharide metabolic process IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
CC GO:0044448 cell cortex part IEP Neighborhood
BP GO:0045229 external encapsulating structure organization IEP Neighborhood
BP GO:0046351 disaccharide biosynthetic process IEP Neighborhood
MF GO:0046527 glucosyltransferase activity IEP Neighborhood
MF GO:0046873 metal ion transmembrane transporter activity IEP Neighborhood
BP GO:0046903 secretion IEP Neighborhood
MF GO:0050664 oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor IEP Neighborhood
BP GO:0051179 localization IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood
BP GO:0051273 beta-glucan metabolic process IEP Neighborhood
BP GO:0051274 beta-glucan biosynthetic process IEP Neighborhood
MF GO:0052689 carboxylic ester hydrolase activity IEP Neighborhood
BP GO:0055085 transmembrane transport IEP Neighborhood
BP GO:0070838 divalent metal ion transport IEP Neighborhood
BP GO:0071554 cell wall organization or biogenesis IEP Neighborhood
BP GO:0071555 cell wall organization IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
BP GO:0071840 cellular component organization or biogenesis IEP Neighborhood
BP GO:0072511 divalent inorganic cation transport IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
MF GO:0098772 molecular function regulator IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
BP GO:1901564 organonitrogen compound metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR006918 COBRA_pln 1 162
No external refs found!