Description : Pentatricopeptide repeat-containing protein At2g22070 OS=Arabidopsis thaliana (sp|q9shz8|pp168_arath : 507.0)
Gene families : OG0021291 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0015615 (LandPlants) Phylogenetic Tree(s): OG_05_0015615_tree ,
OG_06_0015319 (SeedPlants) Phylogenetic Tree(s): OG_06_0015319_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: LOC_Os07g13540.1 | |
Cluster | HCCA: Cluster_167 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Zm00001e033171_P001 | No alias | Pentatricopeptide repeat-containing protein At2g22070... | 0.06 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0008270 | zinc ion binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0005643 | nuclear pore | IEP | Neighborhood |
BP | GO:0008033 | tRNA processing | IEP | Neighborhood |
BP | GO:0034470 | ncRNA processing | IEP | Neighborhood |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR032867 | DYW_dom | 586 | 710 |
IPR002885 | Pentatricopeptide_repeat | 148 | 176 |
IPR002885 | Pentatricopeptide_repeat | 416 | 442 |
IPR002885 | Pentatricopeptide_repeat | 78 | 106 |
IPR002885 | Pentatricopeptide_repeat | 487 | 510 |
IPR002885 | Pentatricopeptide_repeat | 388 | 410 |
IPR002885 | Pentatricopeptide_repeat | 179 | 203 |
IPR002885 | Pentatricopeptide_repeat | 283 | 303 |
IPR002885 | Pentatricopeptide_repeat | 315 | 344 |
IPR002885 | Pentatricopeptide_repeat | 455 | 478 |
IPR002885 | Pentatricopeptide_repeat | 208 | 249 |
No external refs found! |