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  5. LOC_Os07g14540.1

LOC_Os07g14540.1


Description : R-SNARE component VAMP721/VAMP722 of SNARE cell-plate vesicle fusion complex. VAMP7-type R-type SNARE longin protein


Gene families : OG0000293 (Archaeplastida) Phylogenetic Tree(s): OG0000293_tree ,
OG_05_0000618 (LandPlants) Phylogenetic Tree(s): OG_05_0000618_tree ,
OG_06_0000855 (SeedPlants) Phylogenetic Tree(s): OG_06_0000855_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os07g14540.1
Cluster HCCA: Cluster_48

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00046p00144870 evm_27.TU.AmTr_v1... Vesicle trafficking.SNARE target membrane recognition... 0.02 Archaeplastida
AT1G04750 ATVAMP721,... vesicle-associated membrane protein 721 0.02 Archaeplastida
Cre04.g224750 No alias Vesicle trafficking.SNARE target membrane recognition... 0.01 Archaeplastida
Cre04.g225900 No alias Vesicle trafficking.SNARE target membrane recognition... 0.03 Archaeplastida
GSVIVT01028579001 No alias Vesicle trafficking.SNARE target membrane recognition... 0.03 Archaeplastida
Gb_23049 No alias VAMP7-type R-type SNARE longin protein 0.02 Archaeplastida
LOC_Os03g06960.1 No alias R-SNARE component VAMP721/VAMP722 of SNARE cell-plate... 0.03 Archaeplastida
MA_11045g0010 No alias VAMP7-type R-type SNARE longin protein 0.02 Archaeplastida
MA_174857g0010 No alias R-SNARE component VAMP721/VAMP722 of SNARE cell-plate... 0.02 Archaeplastida
MA_94963g0010 No alias R-SNARE component VAMP721/VAMP722 of SNARE cell-plate... 0.03 Archaeplastida
Mp7g07410.1 No alias VAMP7-type R-type SNARE longin protein 0.02 Archaeplastida
Mp8g09990.1 No alias R-SNARE component VAMP721/VAMP722 of SNARE cell-plate... 0.02 Archaeplastida
Pp3c17_22240V3.1 No alias vesicle-associated membrane protein 726 0.02 Archaeplastida
Pp3c2_2310V3.1 No alias vesicle-associated membrane protein 726 0.04 Archaeplastida
Solyc06g083530.3.1 No alias R-SNARE component VAMP721/VAMP722 of SNARE cell-plate... 0.04 Archaeplastida
Zm00001e011409_P003 No alias R-SNARE component VAMP721/VAMP722 of SNARE cell-plate... 0.02 Archaeplastida
Zm00001e033056_P001 No alias R-SNARE component VAMP721/VAMP722 of SNARE cell-plate... 0.02 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0016021 integral component of membrane IEA Interproscan
BP GO:0016192 vesicle-mediated transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0001882 nucleoside binding IEP Neighborhood
MF GO:0001883 purine nucleoside binding IEP Neighborhood
MF GO:0003779 actin binding IEP Neighborhood
MF GO:0003924 GTPase activity IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
MF GO:0005525 GTP binding IEP Neighborhood
CC GO:0005875 microtubule associated complex IEP Neighborhood
BP GO:0007010 cytoskeleton organization IEP Neighborhood
MF GO:0008092 cytoskeletal protein binding IEP Neighborhood
MF GO:0016462 pyrophosphatase activity IEP Neighborhood
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Neighborhood
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Neighborhood
MF GO:0017111 nucleoside-triphosphatase activity IEP Neighborhood
MF GO:0019001 guanyl nucleotide binding IEP Neighborhood
CC GO:0030286 dynein complex IEP Neighborhood
MF GO:0032549 ribonucleoside binding IEP Neighborhood
MF GO:0032550 purine ribonucleoside binding IEP Neighborhood
MF GO:0032561 guanyl ribonucleotide binding IEP Neighborhood
CC GO:0044430 cytoskeletal part IEP Neighborhood
MF GO:0051087 chaperone binding IEP Neighborhood
InterPro domains Description Start Stop
IPR010908 Longin_dom 49 132
IPR001388 Synaptobrevin 155 240
No external refs found!