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  5. LOC_Os07g15230.1

LOC_Os07g15230.1


Description : Protein ALTERED XYLOGLUCAN 4 OS=Arabidopsis thaliana (sp|o04523|tbl27_arath : 295.0)


Gene families : OG0000288 (Archaeplastida) Phylogenetic Tree(s): OG0000288_tree ,
OG_05_0016062 (LandPlants) Phylogenetic Tree(s): OG_05_0016062_tree ,
OG_06_0015840 (SeedPlants) Phylogenetic Tree(s): OG_06_0015840_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os07g15230.1
Cluster HCCA: Cluster_118

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00006p00266030 evm_27.TU.AmTr_v1... Protein trichome birefringence-like 19 OS=Arabidopsis thaliana 0.07 Archaeplastida
AMTR_s00006p00266110 evm_27.TU.AmTr_v1... Protein trichome birefringence-like 19 OS=Arabidopsis thaliana 0.07 Archaeplastida
AMTR_s00088p00114920 evm_27.TU.AmTr_v1... Protein ALTERED XYLOGLUCAN 4-like OS=Arabidopsis thaliana 0.02 Archaeplastida
AT1G01430 TBL25 TRICHOME BIREFRINGENCE-LIKE 25 0.03 Archaeplastida
AT1G70230 TBL27 TRICHOME BIREFRINGENCE-LIKE 27 0.03 Archaeplastida
AT4G01080 TBL26 TRICHOME BIREFRINGENCE-LIKE 26 0.04 Archaeplastida
AT5G15890 TBL21 TRICHOME BIREFRINGENCE-LIKE 21 0.02 Archaeplastida
Gb_23681 No alias Protein trichome birefringence-like 18 OS=Arabidopsis... 0.02 Archaeplastida
Gb_25866 No alias mannan O-acetyltransferase (MOAT) 0.02 Archaeplastida
LOC_Os01g46400.1 No alias Protein trichome birefringence-like 19 OS=Arabidopsis... 0.04 Archaeplastida
MA_245850g0010 No alias mannan O-acetyltransferase (MOAT) 0.02 Archaeplastida
Pp3c16_10090V3.1 No alias TRICHOME BIREFRINGENCE-LIKE 25 0.03 Archaeplastida
Pp3c2_37020V3.1 No alias TRICHOME BIREFRINGENCE-LIKE 25 0.02 Archaeplastida
Smo418889 No alias Protein trichome birefringence-like 19 OS=Arabidopsis thaliana 0.02 Archaeplastida
Solyc02g089680.4.1 No alias Protein trichome birefringence-like 19 OS=Arabidopsis... 0.03 Archaeplastida
Solyc02g089690.3.1 No alias Protein trichome birefringence-like 19 OS=Arabidopsis... 0.03 Archaeplastida
Solyc02g089710.3.1 No alias Protein trichome birefringence-like 19 OS=Arabidopsis... 0.05 Archaeplastida
Solyc03g046270.4.1 No alias Protein trichome birefringence-like 19 OS=Arabidopsis... 0.04 Archaeplastida
Zm00001e004741_P002 No alias Protein trichome birefringence-like 19 OS=Arabidopsis... 0.06 Archaeplastida
Zm00001e015715_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e015716_P001 No alias Protein trichome birefringence-like 20 OS=Arabidopsis... 0.06 Archaeplastida
Zm00001e020296_P001 No alias Protein trichome birefringence-like 20 OS=Arabidopsis... 0.07 Archaeplastida
Zm00001e020298_P002 No alias Protein trichome birefringence-like 19 OS=Arabidopsis... 0.02 Archaeplastida
Zm00001e030880_P002 No alias Protein ALTERED XYLOGLUCAN 4-like OS=Arabidopsis... 0.02 Archaeplastida
Zm00001e030881_P001 No alias Protein ALTERED XYLOGLUCAN 4 OS=Arabidopsis thaliana... 0.2 Archaeplastida
Zm00001e030883_P001 No alias Protein ALTERED XYLOGLUCAN 4 OS=Arabidopsis thaliana... 0.2 Archaeplastida
Zm00001e036072_P001 No alias Protein ALTERED XYLOGLUCAN 4 OS=Arabidopsis thaliana... 0.2 Archaeplastida
Zm00001e036803_P001 No alias Protein trichome birefringence-like 19 OS=Arabidopsis... 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004601 peroxidase activity IEP Neighborhood
BP GO:0006486 protein glycosylation IEP Neighborhood
BP GO:0006950 response to stress IEP Neighborhood
BP GO:0006979 response to oxidative stress IEP Neighborhood
MF GO:0008107 galactoside 2-alpha-L-fucosyltransferase activity IEP Neighborhood
MF GO:0008168 methyltransferase activity IEP Neighborhood
MF GO:0008194 UDP-glycosyltransferase activity IEP Neighborhood
MF GO:0008417 fucosyltransferase activity IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
MF GO:0016209 antioxidant activity IEP Neighborhood
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Neighborhood
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Neighborhood
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
MF GO:0031127 alpha-(1,2)-fucosyltransferase activity IEP Neighborhood
BP GO:0042546 cell wall biogenesis IEP Neighborhood
BP GO:0043413 macromolecule glycosylation IEP Neighborhood
MF GO:0043531 ADP binding IEP Neighborhood
BP GO:0044085 cellular component biogenesis IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
BP GO:0070085 glycosylation IEP Neighborhood
BP GO:0071554 cell wall organization or biogenesis IEP Neighborhood
BP GO:0071840 cellular component organization or biogenesis IEP Neighborhood
InterPro domains Description Start Stop
IPR025846 PMR5_N_dom 84 133
IPR026057 PC-Esterase 139 449
No external refs found!