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  5. AMTR_s00008p00146780

AMTR_s00008p00146780 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00008.70

Description : Protein YLS3 OS=Arabidopsis thaliana


Gene families : OG0000162 (Archaeplastida) Phylogenetic Tree(s): OG0000162_tree ,
OG_05_0000065 (LandPlants) Phylogenetic Tree(s): OG_05_0000065_tree ,
OG_06_0000848 (SeedPlants) Phylogenetic Tree(s): OG_06_0000848_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00008p00146780
Cluster HCCA: Cluster_126

Target Alias Description ECC score Gene Family Method Actions
AT1G55260 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.01 Archaeplastida
AT2G13820 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.03 Archaeplastida
AT3G22600 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.02 Archaeplastida
AT3G43720 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.01 Archaeplastida
LOC_Os07g07790.1 No alias xylogen-type arabinogalactan protein 0.01 Archaeplastida
MA_10069449g0010 No alias xylogen-type arabinogalactan protein 0.03 Archaeplastida
MA_133359g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
Smo403556 No alias No description available 0.01 Archaeplastida
Smo411802 No alias No description available 0.01 Archaeplastida
Zm00001e005959_P003 No alias xylogen-type arabinogalactan protein 0.02 Archaeplastida
Zm00001e005960_P003 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e005961_P001 No alias xylogen-type arabinogalactan protein 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEP Neighborhood
MF GO:0016746 transferase activity, transferring acyl groups IEP Neighborhood
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Neighborhood
InterPro domains Description Start Stop
IPR016140 Bifunc_inhib/LTP/seed_store 55 130
No external refs found!