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  5. LOC_Os07g22220.1

LOC_Os07g22220.1


Description : component HOS15 of HDA9-PWR deacetylation complex


Gene families : OG0003435 (Archaeplastida) Phylogenetic Tree(s): OG0003435_tree ,
OG_05_0004300 (LandPlants) Phylogenetic Tree(s): OG_05_0004300_tree ,
OG_06_0004015 (SeedPlants) Phylogenetic Tree(s): OG_06_0004015_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os07g22220.1
Cluster HCCA: Cluster_96

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00021680.25 No alias WD40 repeat-containing protein HOS15 OS=Arabidopsis thaliana 0.01 Archaeplastida
GSVIVT01000179001 No alias WD40 repeat-containing protein HOS15 OS=Arabidopsis thaliana 0.06 Archaeplastida
Mp6g00250.1 No alias component HOS15 of HDA9-PWR deacetylation complex 0.02 Archaeplastida
Solyc04g078320.4.1 No alias component HOS15 of HDA9-PWR deacetylation complex 0.04 Archaeplastida
Zm00001e008690_P001 No alias component HOS15 of HDA9-PWR deacetylation complex 0.03 Archaeplastida
Zm00001e040608_P001 No alias component HOS15 of HDA9-PWR deacetylation complex 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Neighborhood
MF GO:0004484 mRNA guanylyltransferase activity IEP Neighborhood
MF GO:0004721 phosphoprotein phosphatase activity IEP Neighborhood
BP GO:0006370 7-methylguanosine mRNA capping IEP Neighborhood
BP GO:0006397 mRNA processing IEP Neighborhood
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP Neighborhood
MF GO:0008192 RNA guanylyltransferase activity IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
BP GO:0009452 7-methylguanosine RNA capping IEP Neighborhood
BP GO:0016071 mRNA metabolic process IEP Neighborhood
BP GO:0016311 dephosphorylation IEP Neighborhood
MF GO:0016791 phosphatase activity IEP Neighborhood
MF GO:0016853 isomerase activity IEP Neighborhood
MF GO:0016859 cis-trans isomerase activity IEP Neighborhood
BP GO:0018193 peptidyl-amino acid modification IEP Neighborhood
BP GO:0018208 peptidyl-proline modification IEP Neighborhood
BP GO:0036260 RNA capping IEP Neighborhood
MF GO:0042393 histone binding IEP Neighborhood
MF GO:0043565 sequence-specific DNA binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
MF GO:0070568 guanylyltransferase activity IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
InterPro domains Description Start Stop
IPR006594 LisH 8 33
IPR001680 WD40_repeat 473 511
IPR001680 WD40_repeat 255 294
IPR001680 WD40_repeat 201 234
IPR001680 WD40_repeat 381 418
IPR001680 WD40_repeat 301 335
IPR001680 WD40_repeat 423 468
No external refs found!