1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os07g22930.3

LOC_Os07g22930.3


Description : granule-bound starch (amylose) synthase


Gene families : OG0000161 (Archaeplastida) Phylogenetic Tree(s): OG0000161_tree ,
OG_05_0004954 (LandPlants) Phylogenetic Tree(s): OG_05_0004954_tree ,
OG_06_0005536 (SeedPlants) Phylogenetic Tree(s): OG_06_0005536_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os07g22930.3
Cluster HCCA: Cluster_342

Target Alias Description ECC score Gene Family Method Actions
AT4G18240 ATSS4, SS4, SSIV starch synthase 4 0.03 Archaeplastida
Cpa|evm.model.tig00020746.8 No alias Probable starch synthase 4, chloroplastic/amyloplastic... 0.02 Archaeplastida
GSVIVT01028521001 No alias No description available 0.02 Archaeplastida
Pp3c12_3280V3.1 No alias Glycogen/starch synthases, ADP-glucose type 0.02 Archaeplastida
Pp3c1_8710V3.1 No alias starch synthase 4 0.01 Archaeplastida
Pp3c21_3210V3.1 No alias UDP-Glycosyltransferase superfamily protein 0.01 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0008168 methyltransferase activity IEP Neighborhood
MF GO:0008171 O-methyltransferase activity IEP Neighborhood
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Neighborhood
MF GO:0016853 isomerase activity IEP Neighborhood
MF GO:0016866 intramolecular transferase activity IEP Neighborhood
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP Neighborhood
InterPro domains Description Start Stop
IPR013534 Starch_synth_cat_dom 83 342
IPR001296 Glyco_trans_1 400 521
No external refs found!