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  5. LOC_Os07g27320.1

LOC_Os07g27320.1


Description : endo-beta-1,4-xylanase


Gene families : OG0003136 (Archaeplastida) Phylogenetic Tree(s): OG0003136_tree ,
OG_05_0004269 (LandPlants) Phylogenetic Tree(s): OG_05_0004269_tree ,
OG_06_0004372 (SeedPlants) Phylogenetic Tree(s): OG_06_0004372_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os07g27320.1

Target Alias Description ECC score Gene Family Method Actions
AT4G08160 No alias glycosyl hydrolase family 10 protein /... 0.01 Archaeplastida
Gb_13086 No alias endo-beta-1,4-xylanase 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004650 polygalacturonase activity IEP Neighborhood
MF GO:0005092 GDP-dissociation inhibitor activity IEP Neighborhood
BP GO:0007165 signal transduction IEP Neighborhood
BP GO:0007264 small GTPase mediated signal transduction IEP Neighborhood
MF GO:0030234 enzyme regulator activity IEP Neighborhood
MF GO:0030695 GTPase regulator activity IEP Neighborhood
BP GO:0035556 intracellular signal transduction IEP Neighborhood
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Neighborhood
MF GO:0098772 molecular function regulator IEP Neighborhood
InterPro domains Description Start Stop
IPR003305 CenC_carb-bd 391 524
IPR003305 CenC_carb-bd 558 699
IPR003305 CenC_carb-bd 220 358
IPR003305 CenC_carb-bd 51 189
IPR001000 GH10 758 1015
No external refs found!